RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 TMEM45AQ9NWC5 275 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 SLC25A37Q9NYZ2 338 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 VAPAQ9P0L0 249 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 ARMCX1Q9P291 453 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 P2RX2Q9UBL9 471 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 LIPT1Q9Y234 373 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 NDUFAF1Q9Y375 327 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 MRPS18CQ9Y3D5 142 aaKnown RBP8.9□□□□□ -0.98
CALD1-223ENST00000496024 FAM215AQ9Y5M1 114 aa8.9□□□□□ -0.98
CALD1-223ENST00000496024 ASH1LQ9NR48 2969 aaKnown RBP8.9□□□□□ -0.99
CALD1-223ENST00000496024 CENPEQ02224 2701 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 DOCK7Q96N67 2140 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 LOC100653049A0A140TA62 436 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 TMEM247A6NEH6 219 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 WIPF3A6NGB9 483 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 CLDN24A6NM45 220 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 EVPLLA8MZ36 301 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 H3BML4 177 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 ZNF264O43296 627 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 SEC14L5O43304 696 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 KRT34O76011 436 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 CLDN1O95832 211 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 OPN1LWP04000 364 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 GLI4P10075 376 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 GABRA1P14867 456 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 HOXB9P17482 250 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 POU3F2P20265 443 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 TXNL4AP83876 142 aaKnown RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 NFYCQ13952 458 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 RGNQ15493 299 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 TOMM34Q15785 309 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 MMEL1Q495T6 779 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 NHSL2Q5HYW2 709 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 RPS26P11Q5JNZ5 115 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 HIST2H2BCQ6DN03 193 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 PLXDC2Q6UX71 529 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 DLEU7Q6UYE1 221 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 LRRC74BQ6ZQY2 392 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 EIF3MQ7L2H7 374 aaKnown RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 SPATA21Q7Z572 469 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 MTERF4Q7Z6M4 381 aaKnown RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 CPLX4Q7Z7G2 160 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 CCDC71Q8IV32 467 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 PM20D2Q8IYS1 436 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 POU5F2Q8N7G0 328 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 ITLN2Q8WWU7 325 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 MAL2Q969L2 176 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 TMEM19Q96HH6 336 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 TRIB1Q96RU8 372 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 PIGQQ9BRB3 760 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 TTYH2Q9BSA4 534 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 PRDM14Q9GZV8 571 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 NSRP1Q9H0G5 558 aaKnown RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 IKZF5Q9H5V7 419 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 HHATLQ9HCP6 504 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 POLE3Q9NRF9 147 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 MED17Q9NVC6 651 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 ZNF337Q9Y3M9 751 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 L3MBTL1Q9Y468 752 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 CAPN7Q9Y6W3 813 aa8.89□□□□□ -0.99
CALD1-223ENST00000496024 INTS1Q8N201 2190 aaKnown RBP8.89□□□□□ -0.99
CALD1-223ENST00000496024 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 A0A087WZY1 265 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 TRBV5-3A0A0A0MS03 114 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 GMNCA6NCL1 334 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 C5orf58C9J3I9 102 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 H0YC42 278 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 FBP2O00757 339 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 EIF4E2O60573 245 aaKnown RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 HOXD4P09016 255 aaPredicted RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 TFPTP0C1Z6 253 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 PEPDP12955 493 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 DRD4P21917 467 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 PPIBP23284 216 aaKnown RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 CHMP24386 653 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 COL8A1P27658 744 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 RYKP34925 604 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 MAGEA8P43361 318 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 LHX2P50458 406 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 P2RX1P51575 399 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 CRISP3P54108 245 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 TPD52P55327 224 aaPredicted RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 MTPNP58546 118 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 CAPRIN1Q14444 709 aaKnown RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 FGFBP1Q14512 234 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 CDSNQ15517 529 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 MAPK11Q15759 364 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 PLPPR5Q32ZL2 321 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 ACSF3Q4G176 576 aaPredicted RBP8.88□□□□□ -0.99
CALD1-223ENST00000496024 GCNT6Q5T4J0 391 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 SNX32Q86XE0 403 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 MED12LQ86YW9 2145 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 C10orf111Q8N326 155 aa8.88□□□□□ -0.99
CALD1-223ENST00000496024 ZNF808Q8N4W9 903 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms