RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981		A0A096LPK6	155 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	IGKV3D-11	A0A0A0MRZ8	115 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FEZF1	A0PJY2	475 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CTAGE15	A4D2H0	777 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	NKX2-6	A6NCS4	301 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	GABRR3	A8MPY1	467 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	MIF4GD	A9UHW6	222 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	C4orf51	C9J302	202 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981		H0YIG0	161 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	SMAD9	O15198	467 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	NME2P1	O60361	137 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	VPS26A	O75436	327 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	RDH16	O75452	317 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CRLF1	O75462	422 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CTAG2	O75638	210 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	JTB	O76095	146 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ZWINT	O95229	277 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	NSA2	O95478	260 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CRYAB	P02511	175 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	HIST1H2AB	P04908	130 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	APRT	P07741	180 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	TPM1	P09493	284 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ETS1	P14921	441 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	STMN1	P16949	149 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	IL1RN	P18510	177 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	HIST1H2AD	P20671	130 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	OGN	P20774	298 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	BMP5	P22003	454 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	DNASE1	P24855	282 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CALR	P27797	417 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	IMPA1	P29218	277 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CMPK1	P30085	196 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FDFT1	P37268	417 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	COIL	P38432	576 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	MAGEA6	P43360	314 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	GPR12	P47775	334 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	NR0B1	P51843	470 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	EMP2	P54851	167 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	DLX5	P56178	289 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KRTAP1-1	Q07627	177 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FAM27E3	Q08E93	113 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PMPCA	Q10713	525 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PTK6	Q13882	451 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FAM53B	Q14153	422 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ARHGAP19	Q14CB8	494 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	OR1C1	Q15619	314 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KRTAP24-1	Q3LI83	254 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KLHL26	Q53HC5	615 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FASTKD1	Q53R41	847 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ACER2	Q5QJU3	275 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PTRHD1	Q6GMV3	140 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ZNF549	Q6P9A3	640 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CENPU	Q71F23	418 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	HIST3H2A	Q7L7L0	130 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ANKRD37	Q7Z713	158 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	LINC00523	Q86TU6	105 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CTAGE6	Q86UF2	777 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	IGFN1	Q86VF2	1251 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PLD3	Q8IV08	490 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	RPRML	Q8N4K4	120 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KIF2B	Q8N4N8	673 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	DNAAF3	Q8N9W5	541 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	MCU	Q8NE86	351 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	OR9A1P	Q8NGU1	263 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CD200R1	Q8TD46	325 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	AGAP11	Q8TF27	550 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	SMPDL3A	Q92484	453 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	TSLP	Q969D9	159 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	LRRC45	Q96CN5	670 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ZNF503	Q96F45	646 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	DACH2	Q96NX9	599 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PANX3	Q96QZ0	392 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PANX2	Q96RD6	677 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ATP6V0B	Q99437	205 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PKP4	Q99569	1192 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KIFC1	Q9BW19	673 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KCNK15	Q9H427	330 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	YY1AP1	Q9H869	796 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	TRIM45	Q9H8W5	580 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	MRPS30	Q9NP92	439 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	MMP25	Q9NPA2	562 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	CHRAC1	Q9NRG0	131 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	FAM114A2	Q9NRY5	505 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	SIRT3	Q9NTG7	399 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	ADPRHL2	Q9NX46	363 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	UTS2R	Q9UKP6	389 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	LAMP3	Q9UQV4	416 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	EXPH5	Q8NEV8	1989 aa		3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	PHF3	Q92576	2039 aa	Known RBP	3.88	□□□□□ -1.79
VPS52-222	ENST00000495981	KCNE1B	A0A087WTH5	132 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981		A0A0G2JMM0	328 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981		A0A1W2PPB8	328 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981		A0A1W2PRS3	328 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981	ZNF860	A6NHJ4	632 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981	ANXA2P2	A6NMY6	339 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981	KIR3DP1	A8MWS1	328 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981	GOLGA8K	D6RF30	607 aa		3.87	□□□□□ -1.79
VPS52-222	ENST00000495981	NPIPA5	E9PKD4	350 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms