RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PSMB1P20618 241 aaKnown RBP19.71■□□□□ 0.75
HDDC3-203ENST00000494993 PCSK6P29122 969 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 POU6F2P78424 691 aaPredicted RBP19.71■□□□□ 0.75
HDDC3-203ENST00000494993 GALNTL6Q49A17 601 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 GTF2IRD2BQ6EKJ0 949 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 R3HCC1LQ7Z5L2 792 aaKnown RBP19.71■□□□□ 0.75
HDDC3-203ENST00000494993 GTF2IRD2Q86UP8 949 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 LILRA2Q8N149 483 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 C4orf33Q8N1A6 199 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 TMEM204Q9BSN7 226 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 BTBD2Q9BX70 525 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 DUSP22Q9NRW4 184 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 ZCCHC3Q9NUD5 404 aaKnown RBP19.71■□□□□ 0.75
HDDC3-203ENST00000494993 HS3ST1O14792 307 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 TMCC2O75069 709 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 HMGN2P05204 90 aaKnown RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 BCKDHAP12694 445 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 NID1P14543 1247 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 SHC1P29353 583 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 EIF1P41567 113 aaKnown RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 CARD18P57730 90 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 FOXF1Q12946 379 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 LASP1Q14847 261 aaKnown RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 MLC1Q15049 377 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF239Q16600 458 aaKnown RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 LRIG3Q6UXM1 1119 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF611Q8N823 705 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 EPS8L3Q8TE67 593 aaKnown RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 RNF128Q8TEB7 428 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 UBLCP1Q8WVY7 318 aaPredicted RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 ROBO4Q8WZ75 1007 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 STACQ99469 402 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 CXorf56Q9H5V9 222 aa19.7■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF701Q9NV72 531 aaPredicted RBP19.7■□□□□ 0.74
HDDC3-203ENST00000494993 TRIM13O60858 407 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 PABPC4LP0CB38 370 aaKnown RBP19.69■□□□□ 0.74
HDDC3-203ENST00000494993 DDX5P17844 614 aaKnown RBP19.69■□□□□ 0.74
HDDC3-203ENST00000494993 ELK4P28324 431 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 SFTPDP35247 375 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 HPCAL1P37235 193 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF117Q03924 483 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF844Q08AG5 666 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
HDDC3-203ENST00000494993 PRIMA1Q86XR5 153 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 HOMEZQ8IX15 550 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 DDIASQ8IXT1 998 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 PHOSPHO1Q8TCT1 267 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 TWIST2Q8WVJ9 160 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 CDS1Q92903 461 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 CHMP6Q96FZ7 201 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 PIGUQ9H490 435 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 GIN1Q9NXP7 522 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 ATP6V1HQ9UI12 483 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 CADP27708 2225 aa19.69■□□□□ 0.74
HDDC3-203ENST00000494993 SCAMP2O15127 329 aaKnown RBP19.68■□□□□ 0.74
HDDC3-203ENST00000494993 CDC73Q6P1J9 531 aa19.68■□□□□ 0.74
HDDC3-203ENST00000494993 STEAP2Q8NFT2 490 aa19.68■□□□□ 0.74
HDDC3-203ENST00000494993 ABHD3Q8WU67 409 aa19.68■□□□□ 0.74
HDDC3-203ENST00000494993 CPNE4Q96A23 557 aaPredicted RBP19.68■□□□□ 0.74
HDDC3-203ENST00000494993 REXO5Q96IC2 774 aaKnown RBP19.68■□□□□ 0.74
HDDC3-203ENST00000494993 SRXN1Q9BYN0 137 aa19.68■□□□□ 0.74
HDDC3-203ENST00000494993 TIGARQ9NQ88 270 aa19.68■□□□□ 0.74
HDDC3-203ENST00000494993 CHD3Q12873 2000 aaKnown RBP19.68■□□□□ 0.74
HDDC3-203ENST00000494993 TMEM114B3SHH9 223 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 TMEM233B4DJY2 109 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 PIP5K1BO14986 540 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 EFNA2O43921 213 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 GCM2O75603 506 aaPredicted RBP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 CHRNGP07510 517 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 FGF4P08620 206 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 ATP6V1C1P21283 382 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 ADH6P28332 368 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 RPL3P39023 403 aaKnown RBP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 RNPS1Q15287 305 aaKnown RBP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 UGT3A2Q3SY77 523 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 TMEM201Q5SNT2 666 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 CBLN3Q6UW01 205 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 TFAP2EQ6VUC0 442 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 EIF1ADQ8N9N8 165 aaKnown RBP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF527Q8NB42 609 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 OR7A2PQ8NGA2 310 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 FBXO27Q8NI29 283 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 AKAP1Q92667 903 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 S100PBPQ96BU1 408 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 TACO1Q9BSH4 297 aaKnown RBP19.67■□□□□ 0.74
HDDC3-203ENST00000494993 GIMAP2Q9UG22 337 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 ICAM5Q9UMF0 924 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 TRAF6Q9Y4K3 522 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 SNX8Q9Y5X2 465 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 CR1P17927 2039 aa19.67■□□□□ 0.74
HDDC3-203ENST00000494993 RTTNQ86VV8 2226 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 NPIPA5A0A0B4J1W7 369 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 INAFM1C9JVW0 142 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 NPIPA7E9PJI5 369 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 ZNF195O14628 629 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 OIP5O43482 229 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 NUDT14O95848 222 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 NPIPA8P0DM63 369 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 LAMP1P11279 417 aa19.66■□□□□ 0.74
HDDC3-203ENST00000494993 MAPK1P28482 360 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms