RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 TMCO6Q96DC7 493 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 SPACA9Q96E40 222 aaPredicted RBP10.12□□□□□ -0.79
PKP4-215ENST00000494945 RDH12Q96NR8 316 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 ALPK1Q96QP1 1244 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 RASL10BQ96S79 203 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 TBL1XR1Q9BZK7 514 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 TRIM2Q9C040 744 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
PKP4-215ENST00000494945 HHATLQ9HCP6 504 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 PDP1Q9P0J1 537 aaPredicted RBP10.12□□□□□ -0.79
PKP4-215ENST00000494945 RHCGQ9UBD6 479 aa10.12□□□□□ -0.79
PKP4-215ENST00000494945 TRAPPC13A5PLN9 417 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 TRABD2BA6NFA1 517 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 CPSF4LA6NMK7 179 aaKnown RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 GTPBP1O00178 669 aaKnown RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 TP53I11O14683 189 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 NDUFB5O43674 189 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 EIF4E2O60573 245 aaKnown RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 BCAS1O75363 584 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 CYP7B1O75881 506 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 CCNB2O95067 398 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 UBTFL6P0CB48 400 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 GKN3PP0CG01 181 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ITGAMP11215 1152 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 PRG2P13727 222 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ANXA8P13928 327 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 UQCRBP14927 111 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ACADSP16219 412 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 HTR2AP28223 471 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ACAA2P42765 397 aaKnown RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 SLC6A8P48029 635 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 RNF144AP50876 292 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 FBXW4P57775 412 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 MLF1P58340 268 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 RPP38P78345 283 aaKnown RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 Q0VFX4 171 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 EPS8Q12929 822 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 TGIF1Q15583 401 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 RFX4Q33E94 735 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ZNF791Q3KP31 576 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 TBC1D25Q3MII6 688 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 CMPK2Q5EBM0 449 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 FGD3Q5JSP0 725 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 DCST1Q5T197 706 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 FAHD1Q6P587 224 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ZNF613Q6PF04 617 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 APOOLQ6UXV4 268 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 TSPYL5Q86VY4 417 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 HS3ST5Q8IZT8 346 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 OR10G2Q8NGC3 310 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ADAMTS16Q8TE57 1224 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ASB15Q8WXK1 588 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 FER1L6-AS2Q96M78 137 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 FUZQ9BT04 418 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 OSBPL11Q9BXB4 747 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 LAT2Q9GZY6 243 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 TMEM27Q9HBJ8 222 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 MAN2C1Q9NTJ4 1040 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 SMPD3Q9NY59 655 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 KIF17Q9P2E2 1029 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 RAB26Q9ULW5 256 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 ORC6Q9Y5N6 252 aa10.11□□□□□ -0.79
PKP4-215ENST00000494945 MAGED1Q9Y5V3 778 aaPredicted RBP10.11□□□□□ -0.79
PKP4-215ENST00000494945 TNRC6AQ8NDV7 1962 aaKnown RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 TRBV4-1A0A0J9YWV2 114 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SH3PXD2BA1X283 911 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 C7orf72A4D263 438 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 ANGPTL1O95841 491 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 CDH2P19022 906 aaPredicted RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 SOX3P41225 446 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SSR4P51571 173 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 RAD23AP54725 363 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 HOXC5Q00444 222 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 FOXC1Q12948 553 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 AIMP2Q13155 320 aaKnown RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 SKP2Q13309 424 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 TAF11Q15544 211 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 OR1Q1Q15612 314 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 CD226Q15762 336 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 DCAF10Q5QP82 559 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SWT1Q5T5J6 900 aaKnown RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 KDM4DQ6B0I6 523 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 TMEM81Q6P7N7 255 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 GDF7Q7Z4P5 450 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 LSMEM1Q8N8F7 131 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 ATG16L2Q8NAA4 619 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SLC7A13Q8TCU3 470 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 GRHL3Q8TE85 626 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 THAP4Q8WY91 577 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SLC38A4Q969I6 547 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SLC41A3Q96GZ6 507 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 NODALQ96S42 347 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SECISBP2Q96T21 854 aaKnown RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 BARD1Q99728 777 aaKnown RBP10.1□□□□□ -0.79
PKP4-215ENST00000494945 PRR14Q9BWN1 585 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 Q9H521 79 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 CDCP1Q9H5V8 836 aa10.1□□□□□ -0.79
PKP4-215ENST00000494945 SMURF2Q9HAU4 748 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms