RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LILRA2Q8N149 483 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 UBLCP1Q8WVY7 318 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-208ENST00000494780 PLPPR2Q96GM1 343 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 STACQ99469 402 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 SIRT3Q9NTG7 399 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-208ENST00000494780 ZCCHC3Q9NUD5 404 aaKnown RBP20.75■□□□□ 0.91
COL27A1-208ENST00000494780 GIN1Q9NXP7 522 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 ATP6V1HQ9UI12 483 aa20.75■□□□□ 0.91
COL27A1-208ENST00000494780 SMIM23A6NLE4 172 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 FGF4P08620 206 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 ELK4P28324 431 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 HPCAL1P37235 193 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 RPL3P39023 403 aaKnown RBP20.74■□□□□ 0.91
COL27A1-208ENST00000494780 WFDC8Q8IUA0 241 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 C4orf33Q8N1A6 199 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 ZNF611Q8N823 705 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 OTUB1Q96FW1 271 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-208ENST00000494780 KLHDC3Q9BQ90 382 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM204Q9BSN7 226 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 PIGUQ9H490 435 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 CXorf56Q9H5V9 222 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 TIGARQ9NQ88 270 aa20.74■□□□□ 0.91
COL27A1-208ENST00000494780 ZNF701Q9NV72 531 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM114B3SHH9 223 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 HS3ST1O14792 307 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 CNOT4O95628 575 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 PLAUP00749 431 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 HMGN2P05204 90 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 EFNA1P20827 205 aaPredicted RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 ADH6P28332 368 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 LASP1Q14847 261 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 ZNF239Q16600 458 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 DDIASQ8IXT1 998 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 STEAP2Q8NFT2 490 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 EPS8L3Q8TE67 593 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 RNF128Q8TEB7 428 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 TWIST2Q8WVJ9 160 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 CHMP6Q96FZ7 201 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 REXO5Q96IC2 774 aaKnown RBP20.73■□□□□ 0.91
COL27A1-208ENST00000494780 HOXD1Q9GZZ0 328 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 C12orf49Q9H741 205 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 TRAF6Q9Y4K3 522 aa20.73■□□□□ 0.91
COL27A1-208ENST00000494780 GJE1A6NN92 205 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 SCAMP2O15127 329 aaKnown RBP20.72■□□□□ 0.91
COL27A1-208ENST00000494780 NID1P14543 1247 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 ATP6V1C1P21283 382 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 MAPK1P28482 360 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 SFTPDP35247 375 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 ZNF117Q03924 483 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 FOXF1Q12946 379 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 RNPS1Q15287 305 aaKnown RBP20.72■□□□□ 0.91
COL27A1-208ENST00000494780 UGT3A2Q3SY77 523 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM201Q5SNT2 666 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 ZNF527Q8NB42 609 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 PHOSPHO1Q8TCT1 267 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 ROBO4Q8WZ75 1007 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 CDS1Q92903 461 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 CPNE4Q96A23 557 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-208ENST00000494780 PPP3R2Q96LZ3 170 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 HDHD5Q9BXW7 423 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 ACTL7BQ9Y614 415 aa20.72■□□□□ 0.91
COL27A1-208ENST00000494780 TLN2Q9Y4G6 2542 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 HIVEP2P31629 2446 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 NPHS1O60500 1241 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 SOX30O94993 753 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 PCSK6P29122 969 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 SHC1P29353 583 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 P2RX1P51575 399 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 SUMO3P55854 103 aaPredicted RBP20.71■□□□□ 0.91
COL27A1-208ENST00000494780 KLHL26Q53HC5 615 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 CDC73Q6P1J9 531 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 ABHD3Q8WU67 409 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 OR5P2Q8WZ92 322 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 TACO1Q9BSH4 297 aaKnown RBP20.71■□□□□ 0.91
COL27A1-208ENST00000494780 ACTRT3Q9BYD9 372 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 EML4Q9HC35 981 aaKnown RBP20.71■□□□□ 0.91
COL27A1-208ENST00000494780 GP6Q9HCN6 339 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 MKS1Q9NXB0 559 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 SNX8Q9Y5X2 465 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 GPC6Q9Y625 555 aaPredicted RBP20.71■□□□□ 0.91
COL27A1-208ENST00000494780 JMJD1CQ15652 2540 aa20.71■□□□□ 0.91
COL27A1-208ENST00000494780 TMEM233B4DJY2 109 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 H3BNH8 94 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 ZNF195O14628 629 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 PIP5K1BO14986 540 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 EFNA2O43921 213 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 GCM2O75603 506 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-208ENST00000494780 CHRNGP07510 517 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 KRT16P08779 473 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 ZNF844Q08AG5 666 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 CBLN3Q6UW01 205 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 NATD1Q8N6N6 113 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 OR7A2PQ8NGA2 310 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 OR56A1Q8NGH5 318 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 FBXO27Q8NI29 283 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 PSMA8Q8TAA3 256 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 ADAMTS15Q8TE58 950 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 S100PBPQ96BU1 408 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 SRXN1Q9BYN0 137 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 KLHL13Q9P2N7 655 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms