RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SEC14L5O43304 696 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 KIAA0513O60268 411 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 TNFRSF21O75509 655 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 UGT2B17O75795 530 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 ZNF708P17019 499 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 ADH7P40394 386 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 MAGEA8P43361 318 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 ARFIP2P53365 341 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 EEFSECP57772 596 aaKnown RBP14.41□□□□□ -0.1
LIME1-209ENST00000494776 FUT5Q11128 374 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 CDSNQ15517 529 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 ZNF141Q15928 474 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 HSPB2Q16082 182 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 BCL2A1Q16548 175 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 SYPL1Q16563 259 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 NDUFAF6Q330K2 333 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 METTL21CQ5VZV1 264 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 NSUN5P2Q63ZY6 315 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 SP5Q6BEB4 398 aaPredicted RBP14.41□□□□□ -0.1
LIME1-209ENST00000494776 ANKFN1Q8N957 763 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 PAIP1Q9H074 479 aaKnown RBP14.41□□□□□ -0.1
LIME1-209ENST00000494776 CALHM2Q9HA72 323 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 KCNJ16Q9NPI9 418 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 P2RX2Q9UBL9 471 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 Q9UFV3 132 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 CD8B2A6NJW9 211 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 CLCA1A8K7I4 914 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 KDM4EB2RXH2 506 aaPredicted RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 CLIC1O00299 241 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 EIF4E2O60573 245 aaKnown RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 CSTAP01040 98 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 GUSBP08236 651 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 ETFAP13804 333 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 ZNF17P17021 662 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 CAPN3P20807 821 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 SUMO3P55854 103 aaPredicted RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 CLDN18P56856 261 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 DSTNP60981 165 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 CHRNEQ04844 493 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 PLPPR5Q32ZL2 321 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 CBLN3Q6UW01 205 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 FRRS1Q6ZNA5 592 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 LRRC74BQ6ZQY2 392 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 EIF3MQ7L2H7 374 aaKnown RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 P4HA3Q7Z4N8 544 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 TOR1AIP2Q8NFQ8 470 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 TNIP2Q8NFZ5 429 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 LILRB4Q8NHJ6 448 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 OIT3Q8WWZ8 545 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 RNF145Q96MT1 663 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 SAP130Q9H0E3 1048 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 CCDC134Q9H6E4 229 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 THUMPD1Q9NXG2 353 aaKnown RBP14.4□□□□□ -0.1
LIME1-209ENST00000494776 CALML5Q9NZT1 146 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 KCNE5Q9UJ90 142 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 AP4B1Q9Y6B7 739 aa14.4□□□□□ -0.1
LIME1-209ENST00000494776 DOPEY1Q5JWR5 2465 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 A0A1W2PP18 115 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 PRAMEF27A3QJZ7 478 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 ANGPT2O15123 496 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 OIP5O43482 229 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 CHRM4P08173 479 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 UBTFL6P0CB48 400 aaPredicted RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 ME2P23368 584 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 GRNP28799 593 aaKnown RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 TIMP3P35625 211 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 EIF1P41567 113 aaKnown RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 RPS3AP61247 264 aaKnown RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 CBFBQ13951 182 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 MAPK14Q16539 360 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 PAGE3Q5JUK9 113 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 SEM1Q6ZVN7 128 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 HMGN2P46Q86SG4 172 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 GRAMD2AQ8IUY3 354 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 GTPBP8Q8N3Z3 284 aaPredicted RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 OR5W2Q8NH69 310 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 TM9SF2Q99805 663 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 UCK2Q9BZX2 261 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 LAT2Q9GZY6 243 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 MTHFD2LQ9H903 347 aaPredicted RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 CACYBPQ9HB71 228 aaKnown RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 LEF1Q9UJU2 399 aaPredicted RBP14.39□□□□□ -0.11
LIME1-209ENST00000494776 ICAM5Q9UMF0 924 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 SLC35A3Q9Y2D2 325 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 NDUFAF1Q9Y375 327 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 L3MBTL1Q9Y468 752 aa14.39□□□□□ -0.11
LIME1-209ENST00000494776 NCOA6Q14686 2063 aaPredicted RBP14.38□□□□□ -0.11
LIME1-209ENST00000494776 PHF3Q92576 2039 aaKnown RBP14.38□□□□□ -0.11
LIME1-209ENST00000494776 CENPVL1A0A0U1RR11 272 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 MBD3L4A6NDZ8 208 aaPredicted RBP14.38□□□□□ -0.11
LIME1-209ENST00000494776 MBD3L3A6NE82 208 aaPredicted RBP14.38□□□□□ -0.11
LIME1-209ENST00000494776 MBD3L5A6NJ08 208 aaPredicted RBP14.38□□□□□ -0.11
LIME1-209ENST00000494776 DVL2O14641 736 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 TOXO94900 526 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 BCHEP06276 602 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 IL7RP16871 459 aa14.38□□□□□ -0.11
LIME1-209ENST00000494776 PPIBP23284 216 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms