RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CBLCQ9ULV8 474 aa9.8□□□□□ -0.84
PRPF4B-209ENST00000494674 LSM2Q9Y333 95 aaKnown RBP9.8□□□□□ -0.84
PRPF4B-209ENST00000494674 CDH10Q9Y6N8 788 aa9.8□□□□□ -0.84
PRPF4B-209ENST00000494674 COL27A1Q8IZC6 1860 aaPredicted RBP9.8□□□□□ -0.84
PRPF4B-209ENST00000494674 A0A1B0GWA3 101 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 LAMTOR5O43504 91 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 INHBBP09529 407 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ZGLP1P0C6A0 271 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CD36P16671 472 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 LIMK1P53667 647 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CSTF1Q05048 431 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 PRKCDQ05655 676 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TIGD6Q17RP2 521 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 VWA2Q5GFL6 755 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 FNDC7Q5VTL7 733 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 C1orf189Q5VU69 101 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 MEDAGQ5VYS4 303 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RRM2BQ7LG56 351 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SLC46A3Q7Z3Q1 461 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TMEM151BQ8IW70 566 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 GPR135Q8IZ08 494 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 LSMEM1Q8N8F7 131 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 FAM71CQ8NEG0 241 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 OR4C3Q8NH37 302 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 C9orf43Q8TAL5 461 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TMEM163Q8TC26 289 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ZNF721Q8TF20 911 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 EDAQ92838 391 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 OR5M11Q96RB7 305 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 G6PC3Q9BUM1 346 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TSSK6Q9BXA6 273 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ARMC7Q9H6L4 198 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 MEPEQ9NQ76 525 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 PNO1Q9NRX1 252 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 PRODH2Q9UF12 536 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SERTAD3Q9UJW9 196 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CFAP54Q96N23 3096 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CPED1A4D0V7 1026 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 KDM4EB2RXH2 506 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CHP2O43745 196 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 FOXD2O60548 495 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RFPL3O75679 317 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 FUT1P19526 365 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TBXA2RP21731 343 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 GRK5P34947 590 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RORAP35398 523 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CTBP2P56545 445 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CCL7P80098 99 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ELAVL1Q15717 326 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SNAPC1Q16533 368 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 PGGHGQ32M88 737 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 NDUFAF6Q330K2 333 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 MINDY4Q4G0A6 757 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CLEC12AQ5QGZ9 265 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ARHGAP40Q5TG30 622 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RNLSQ5VYX0 342 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SLC30A6Q6NXT4 461 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 C19orf48Q6RUI8 117 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 LINC00114Q6XXX2 140 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TMPRSS11FQ6ZWK6 438 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ZNF367Q7RTV3 350 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 C1orf210Q8IVY1 113 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CMIPQ8IY22 773 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ZNF614Q8N883 585 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 OR2I1PQ8NGU4 316 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 WDR36Q8NI36 951 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 NDNFQ8TB73 568 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SLC2A12Q8TD20 617 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 OSTF1Q92882 214 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ADIPOR1Q96A54 375 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CRELD1Q96HD1 420 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ZC3H10Q96K80 434 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 LRR1Q96L50 414 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 SLC46A1Q96NT5 459 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 NUDT9Q9BW91 350 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 YIPF2Q9BWQ6 316 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 VN1R1Q9GZP7 353 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 NXF5Q9H1B4 397 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ATP13A2Q9NQ11 1180 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 TBC1D23Q9NUY8 699 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 MRPS18AQ9NVS2 196 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 CTSFQ9UBX1 484 aa9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 RPL36Q9Y3U8 105 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-209ENST00000494674 IGHV5-10-1A0A0J9YXX1 117 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 SERINC4A6NH21 518 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 UNC119BA6NIH7 251 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 A8MUA0 341 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 PATE3B3GLJ2 98 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 SLC22A1O15245 554 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 SURF4O15260 269 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 TIAF1O95411 115 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 BCL10O95999 233 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 RPLP0P05388 317 aaKnown RBP9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 NGFRP08138 427 aa9.78□□□□□ -0.84
PRPF4B-209ENST00000494674 PPICP45877 212 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms