RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 OR51I1Q9H343 314 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 CARD8Q9Y2G2 431 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 ZNF175Q9Y473 711 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 CSMD2Q7Z408 3487 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 C9JVG2 144 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 SLCO1B7G3V0H7 640 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 GTPBP1O00178 669 aaKnown RBP29.88■■■□□ 2.37
CBX4-203ENST00000494546 OIP5O43482 229 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 NUDT14O95848 222 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 OPN1LWP04000 364 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 OCRLQ01968 901 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 PPP4R4Q6NUP7 873 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 CBLN3Q6UW01 205 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 MED12LQ86YW9 2145 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 FAM222BQ8WU58 562 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 GALNT8Q9NY28 637 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 DTNAQ9Y4J8 743 aa29.88■■■□□ 2.37
CBX4-203ENST00000494546 C7orf72A4D263 438 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 NPIPB9F8W1W9 429 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 SMNDC1O75940 238 aaKnown RBP eCLIP29.87■■■□□ 2.37
CBX4-203ENST00000494546 CRHP06850 196 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 EIF1AXP47813 144 aaKnown RBP29.87■■■□□ 2.37
CBX4-203ENST00000494546 GPR68Q15743 365 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 NDUFAF6Q330K2 333 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 AGBL2Q5U5Z8 902 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 C16orf62Q7Z3J2 963 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 CHDHQ8NE62 594 aaPredicted RBP29.87■■■□□ 2.37
CBX4-203ENST00000494546 LINC01560Q8TB33 94 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 ARL8AQ96BM9 186 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 TMEM185BQ9H7F4 350 aa29.87■■■□□ 2.37
CBX4-203ENST00000494546 AK1P00568 194 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 PSMA4P25789 261 aaKnown RBP29.86■■■□□ 2.37
CBX4-203ENST00000494546 SIRPAP78324 504 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 SORDQ00796 357 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 TNFAIP8L2Q6P589 184 aaPredicted RBP29.86■■■□□ 2.37
CBX4-203ENST00000494546 VWA1Q6PCB0 445 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 OLIG3Q7RTU3 272 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 POC1BQ8TC44 478 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 GPATCH1Q9BRR8 931 aaKnown RBP29.86■■■□□ 2.37
CBX4-203ENST00000494546 EXD2Q9NVH0 621 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 DNAJB12Q9NXW2 375 aaKnown RBP29.86■■■□□ 2.37
CBX4-203ENST00000494546 GPR45Q9Y5Y3 372 aa29.86■■■□□ 2.37
CBX4-203ENST00000494546 TACC2O95359 2948 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 STX11O75558 287 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 CTAG2O75638 210 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 LINGO3P0C6S8 592 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 OR12D1P0DN82 309 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 ME2P23368 584 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 IL12AP29459 219 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 CHI3L1P36222 383 aaPredicted RBP29.85■■■□□ 2.37
CBX4-203ENST00000494546 CPOXP36551 454 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 P2RX1P51575 399 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 RAC1P63000 192 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 ARHGAP11BQ3KRB8 267 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 PDZK1Q5T2W1 519 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 RFWD2Q8NHY2 731 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 MIPOL1Q8TD10 442 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 XAGE5Q8WWM1 108 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 STARD4Q96DR4 205 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 CCDC115Q96NT0 180 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 ZBTB18Q99592 522 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 SLC35A5Q9BS91 424 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 PRRG4Q9BZD6 226 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 RNF122Q9H9V4 155 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 BTNL2Q9UIR0 455 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 MKLN1Q9UL63 735 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 ICAM5Q9UMF0 924 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 POLQO75417 2590 aa29.85■■■□□ 2.37
CBX4-203ENST00000494546 A8MXE2 369 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 FCMRO60667 390 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 FOXF1Q12946 379 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 SLC9B1Q4ZJI4 515 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 ATAD3BQ5T9A4 648 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 SAXO2Q658L1 398 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 TMCO5AQ8N6Q1 288 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 OR10D3Q8NH80 312 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 ZNF75CPQ92670 426 aaPredicted RBP29.84■■■□□ 2.37
CBX4-203ENST00000494546 RAB8BQ92930 207 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 POLDIP3Q9BY77 421 aaKnown RBP29.84■■■□□ 2.37
CBX4-203ENST00000494546 NMUR2Q9GZQ4 415 aa29.84■■■□□ 2.37
CBX4-203ENST00000494546 A6NNC1 897 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 AQP8O94778 261 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 EIF1P41567 113 aaKnown RBP29.83■■■□□ 2.37
CBX4-203ENST00000494546 KIR2DL2P43627 348 aaPredicted RBP29.83■■■□□ 2.37
CBX4-203ENST00000494546 SUMO3P55854 103 aaPredicted RBP29.83■■■□□ 2.37
CBX4-203ENST00000494546 BTLAQ7Z6A9 289 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 NEURL3Q96EH8 262 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 OR52E6Q96RD3 313 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 PANX1Q96RD7 426 aa29.83■■■□□ 2.37
CBX4-203ENST00000494546 TNFSF11O14788 317 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 MSTNO14793 375 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 AGR2O95994 175 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 PGRP06401 933 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 UBL4AP11441 157 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 EPXP11678 715 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 FCGR2AP12318 317 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 IL11P20809 199 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 KHKP50053 298 aa29.82■■■□□ 2.36
CBX4-203ENST00000494546 CTU2Q2VPK5 515 aaKnown RBP29.82■■■□□ 2.36
CBX4-203ENST00000494546 MAVSQ7Z434 540 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms