RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 LILRA2Q8N149 483 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 ZNF611Q8N823 705 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 B4GALNT2Q8NHY0 566 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 PHOSPHO1Q8TCT1 267 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
SKA1-205ENST00000494518 CDS1Q92903 461 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 ZBTB8AQ96BR9 441 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 TACO1Q9BSH4 297 aaKnown RBP11.27□□□□□ -0.61
SKA1-205ENST00000494518 TUBB1Q9H4B7 451 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 GIMAP2Q9UG22 337 aa11.27□□□□□ -0.61
SKA1-205ENST00000494518 WBP11Q9Y2W2 641 aaKnown RBP11.27□□□□□ -0.61
SKA1-205ENST00000494518 IGHV3-15A0A0B4J1V0 119 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 TMEM233B4DJY2 109 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 SLC28A1O00337 649 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 AZIN1O14977 448 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 NUDT14O95848 222 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 SHBGP04278 402 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 NGFRP08138 427 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 CPA3P15088 417 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 PRPH2P23942 346 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 CDKN1AP38936 164 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 CARD18P57730 90 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 DNAJB13P59910 316 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 POU6F2P78424 691 aaPredicted RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZNF117Q03924 483 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 KRTAP1-1Q07627 177 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 CAPRIN1Q14444 709 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 LASP1Q14847 261 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZNF239Q16600 458 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 Q6ZSR9 355 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 IFT20Q8IY31 132 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 C4orf33Q8N1A6 199 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 FAM120BQ96EK7 910 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZBED6CLQ96FA7 236 aaPredicted RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 FCRL1Q96LA6 429 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 CCT7Q99832 543 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 TMEM204Q9BSN7 226 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 TXLNGYQ9BZA5 131 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 UBQLN4Q9NRR5 601 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZCCHC3Q9NUD5 404 aaKnown RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 ZNF701Q9NV72 531 aaPredicted RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 OXSMQ9NWU1 459 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 PAQR5Q9NXK6 330 aaPredicted RBP11.26□□□□□ -0.61
SKA1-205ENST00000494518 GPR52Q9Y2T5 361 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 SNX8Q9Y5X2 465 aa11.26□□□□□ -0.61
SKA1-205ENST00000494518 C7orf72A4D263 438 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 NPIPB8E9PQR5 432 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 EFNA2O43921 213 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 GCM2O75603 506 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 SOD3P08294 240 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 IFI6P09912 130 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 LINGO3P0C6S8 592 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 PSMB1P20618 241 aaKnown RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 IL32P24001 234 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 RPS4XP62701 263 aaKnown RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 FAPQ12884 760 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 TAB1Q15750 504 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 CCDC153Q494R4 210 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 RFTN2Q52LD8 501 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 TMEM201Q5SNT2 666 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 LIPMQ5VYY2 423 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 CBLN3Q6UW01 205 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 TFAP2EQ6VUC0 442 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 TRABD2AQ86V40 505 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 DDIASQ8IXT1 998 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 ZNF614Q8N883 585 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 KBTBD8Q8NFY9 601 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 OR7A2PQ8NGA2 310 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 LILRB1Q8NHL6 650 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 RFWD2Q8NHY2 731 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 ACTRT2Q8TDY3 377 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 RNF128Q8TEB7 428 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 REXO5Q96IC2 774 aaKnown RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 GATA5Q9BWX5 397 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 FANCFQ9NPI8 374 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 GLRX2Q9NS18 164 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 SIRT3Q9NTG7 399 aaPredicted RBP11.25□□□□□ -0.61
SKA1-205ENST00000494518 CARD8Q9Y2G2 431 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
SKA1-205ENST00000494518 A0A1W2PNR3 127 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 C9JVG2 144 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 H3BQF6 201 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 COPEO14579 308 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 LSM1O15116 133 aaKnown RBP11.24□□□□□ -0.61
SKA1-205ENST00000494518 ADAP00813 363 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 HMGN2P05204 90 aaKnown RBP11.24□□□□□ -0.61
SKA1-205ENST00000494518 CHRNGP07510 517 aa11.24□□□□□ -0.61
SKA1-205ENST00000494518 CD3EP07766 207 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms