RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TRIM61Q5EBN2 209 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 SLC25A30Q5SVS4 291 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 SLC27A4Q6P1M0 643 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 ZNF613Q6PF04 617 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 SLC23A3Q6PIS1 610 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 TMEM239Q8WW34 195 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 SLC35B4Q969S0 331 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 ADIPOR1Q96A54 375 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 PHOX2BQ99453 314 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 NXF5Q9H1B4 397 aaKnown RBP15.24■□□□□ 0.03
ATG4B-225ENST00000494465 GPN2Q9H9Y4 310 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-225ENST00000494465 C14orf105Q9NVL8 296 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 EFCAB10A6NFE3 127 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 ARHGAP33O14559 1287 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 PIPP12273 146 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-225ENST00000494465 CKMT1AP12532 417 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 PSMB9P28065 219 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 CTF1Q16619 201 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 ZNF620Q6ZNG0 422 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 RABEPKQ7Z6M1 372 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 RNF113BQ8IZP6 322 aaKnown RBP15.24■□□□□ 0.03
ATG4B-225ENST00000494465 STX19Q8N4C7 294 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 PFN4Q8NHR9 129 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 TEX47Q8TBZ9 253 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 DCUN1D5Q9BTE7 237 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 NUDT9Q9BW91 350 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 C20orf141Q9NUB4 165 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 SIDT1Q9NXL6 827 aaKnown RBP15.24■□□□□ 0.03
ATG4B-225ENST00000494465 MKL2Q9ULH7 1088 aa15.24■□□□□ 0.03
ATG4B-225ENST00000494465 TLX2O43763 284 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-225ENST00000494465 PSMD4P55036 377 aaKnown RBP15.23■□□□□ 0.03
ATG4B-225ENST00000494465 FOXL2P58012 376 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 SYT14P1Q58G82 188 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 LSMEM1Q8N8F7 131 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 OR4Q3Q8NH05 313 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 EFHD2Q96C19 240 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-225ENST00000494465 Q96MT0 163 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 TGIF2Q9GZN2 237 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 WDR87Q6ZQQ6 2873 aa15.23■□□□□ 0.03
ATG4B-225ENST00000494465 IGLV3-12A0A075B6K2 115 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 A0A1B0GWA3 101 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CER1O95813 267 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CCNA2P20248 432 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 MAKP20794 623 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ROR2Q01974 943 aaKnown RBP15.22■□□□□ 0.03
ATG4B-225ENST00000494465 NFATC3Q12968 1075 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 AQP6Q13520 282 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 NDUFAF6Q330K2 333 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 KLHL26Q53HC5 615 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CMIPQ8IY22 773 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 PLPP5Q8NEB5 264 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 FCGR1BQ92637 280 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ZNF426Q9BUY5 554 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CDCA4Q9BXL8 241 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 TMEM27Q9HBJ8 222 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 TAS2R16Q9NYV7 291 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 SERINC4A6NH21 518 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 M0R082 166 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 POLR1CO15160 346 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CHP2O43745 196 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 DYRK3O43781 588 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 NOL3O60936 208 aaKnown RBP15.22■□□□□ 0.03
ATG4B-225ENST00000494465 GABARAPO95166 117 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 PTHP01270 115 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ADORA3P0DMS8 318 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 NR4A1P22736 598 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 TGFBR2P37173 567 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ST13P50502 369 aaKnown RBP15.22■□□□□ 0.03
ATG4B-225ENST00000494465 OCA2Q04671 838 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 PRKCDQ05655 676 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ZSWIM7Q19AV6 140 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CLEC12AQ5QGZ9 265 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 PLAG1Q6DJT9 500 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 LANCL3Q6ZV70 420 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 C9orf40Q8IXQ3 194 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 CLDN22Q8N7P3 220 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 C7orf57Q8NEG2 295 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 GRHL3Q8TE85 626 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 OSTF1Q92882 214 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 ATP13A2Q9NQ11 1180 aa15.22■□□□□ 0.03
ATG4B-225ENST00000494465 MEPEQ9NQ76 525 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-225ENST00000494465 FRG2CA6NGY1 282 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 RFPL3O75679 317 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 IL33O95760 270 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 DBTP11182 482 aaKnown RBP15.21■□□□□ 0.03
ATG4B-225ENST00000494465 FUT1P19526 365 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 FXYD6P3P58550 94 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 ZNF91Q05481 1191 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 EBPQ15125 230 aaKnown RBP15.21■□□□□ 0.03
ATG4B-225ENST00000494465 SNAPC1Q16533 368 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 FNDC7Q5VTL7 733 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 SLITRK4Q8IW52 837 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 OR14A16Q8NHC5 309 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 STT3BQ8TCJ2 826 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 LCORQ96JN0 433 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-225ENST00000494465 LRR1Q96L50 414 aa15.21■□□□□ 0.03
ATG4B-225ENST00000494465 TSSK6Q9BXA6 273 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms