RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SH3BGRL2Q9UJC5 107 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ANGPT4Q9Y264 503 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 RPH3AQ9Y2J0 694 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 DNAJC13O75165 2243 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 NBASA2RRP1 2371 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 B4DXG7 233 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ZIC3O60481 467 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ACTL6AO96019 429 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 RPS4Y1P22090 263 aaKnown RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 SLC6A2P23975 617 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 CA7P43166 264 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 CCR4P51679 360 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 CDK6Q00534 326 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ART3Q13508 389 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 SCARB2Q14108 478 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 SELPLGQ14242 412 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 LARS2Q15031 903 aaKnown RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 MAPK11Q15759 364 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 C3AR1Q16581 482 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 GLYR1Q49A26 553 aaPredicted RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 RPS26P11Q5JNZ5 115 aaPredicted RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ENPP6Q6UWR7 440 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 HMGN2P46Q86SG4 172 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 C11orf65Q8NCR3 313 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 TOR1AIP2Q8NFQ8 470 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ECSITQ9BQ95 431 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 PIGQQ9BRB3 760 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 TMEM38AQ9H6F2 299 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ARMC7Q9H6L4 198 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 TINAGQ9UJW2 476 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF232Q9UNY5 417 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 VDAC3Q9Y277 283 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 SMG1Q96Q15 3661 aaKnown RBP11.32□□□□□ -0.6
TRA2A-209ENST00000494255 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
TRA2A-209ENST00000494255 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 FXYD1O00168 92 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 NDUFAB1O14561 156 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 OIP5O43482 229 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 PGM3O95394 542 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 BMP7P18075 431 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 CHMP24386 653 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 PER3P56645 1201 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 KCNJ10P78508 379 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 CRYZQ08257 329 aaKnown RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 RBBP4Q09028 425 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 CBFBQ13951 182 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 NDUFAF6Q330K2 333 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 RABL3Q5HYI8 236 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 NHSL2Q5HYW2 709 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 CBLN3Q6UW01 205 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 ARSKQ6UWY0 536 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 HIPK4Q8NE63 616 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 OR5M9Q8NGP3 310 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 OR52P1PQ8NH57 321 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 OR5W2Q8NH69 310 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 OR10A6Q8NH74 314 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 SPATA9Q9BWV2 254 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 UGT2B28Q9BY64 529 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 TP63Q9H3D4 680 aaPredicted RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 KAT8Q9H7Z6 458 aaKnown RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 BCL2L10Q9HD36 194 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 TNFRSF10DQ9UBN6 386 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 ICAM5Q9UMF0 924 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 SLC5A6Q9Y289 635 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
TRA2A-209ENST00000494255 PRRC2CQ9Y520 2896 aaKnown RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
TRA2A-209ENST00000494255 LINC01387J3KSC0 135 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 CCL21O00585 134 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 LRRTM2O43300 516 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 NID1P14543 1247 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ETS2P15036 469 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PGM1P36871 562 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 NUDT2P50583 147 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 GFRA1P56159 465 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 SKP2Q13309 424 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PLPPR5Q32ZL2 321 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF585AQ6P3V2 769 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 MTFR2Q6P444 385 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 SERPINA11Q86U17 422 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms