RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 KRTAP10-9P60411 292 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 TOMM34Q15785 309 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-224ENST00000494132 PLPPR5Q32ZL2 321 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 ARHGAP11BQ3KRB8 267 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 GTDC1Q4AE62 458 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 KLHL26Q53HC5 615 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 CHMP1BQ7LBR1 199 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 DMRTC2Q8IXT2 367 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-224ENST00000494132 TMCO5AQ8N6Q1 288 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 CHDHQ8NE62 594 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-224ENST00000494132 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF524Q96C55 264 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 NEURL3Q96EH8 262 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 DTNAQ9Y4J8 743 aa13.25□□□□□ -0.29
ATG4B-224ENST00000494132 PRAMEF27A3QJZ7 478 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 GTPBP1O00178 669 aaKnown RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 EIF1AYO14602 144 aaKnown RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 POLR3GO15318 223 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 STX11O75558 287 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 UGT2B17O75795 530 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 KHKP50053 298 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 IDH3AP50213 366 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ASCL1P50553 236 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 AQP5P55064 265 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TLE4Q04727 773 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 FOXF1Q12946 379 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 MAPK14Q16539 360 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TMEM44Q2T9K0 475 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 GLYR1Q49A26 553 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TIGD2Q4W5G0 525 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 GPAT3Q53EU6 434 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 COX20Q5RI15 118 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 HEPHL1Q6MZM0 1159 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 LUZP2Q86TE4 346 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 GGNQ86UU5 652 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 MISPQ8IVT2 679 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF527Q8NB42 609 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 GOT1L1Q8NHS2 421 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 WNT2BQ93097 391 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 VPS33AQ96AX1 596 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ROPN1LQ96C74 230 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TREX2Q9BQ50 279 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF350Q9GZX5 532 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 HOXD1Q9GZZ0 328 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 QRSL1Q9H0R6 528 aaKnown RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TCF7L2Q9NQB0 619 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 SDR39U1Q9NRG7 319 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 EXD2Q9NVH0 621 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ZIM2Q9NZV7 527 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF629Q9UEG4 869 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-224ENST00000494132 CREBBPQ92793 2442 aa13.24□□□□□ -0.29
ATG4B-224ENST00000494132 TEX15Q9BXT5 2789 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 FREM1Q5H8C1 2179 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 SLC22A20A6NK97 555 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 H3BNH8 94 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 HMGN4O00479 90 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 RFXANKO14593 260 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 BCAS1O75363 584 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 RCBTB2O95199 551 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 LINGO3P0C6S8 592 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 UBL4AP11441 157 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 PSMA4P25789 261 aaKnown RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 SHC1P29353 583 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 P2RX1P51575 399 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 POLR2JP52435 117 aaKnown RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 SIRPAP78324 504 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 MYBPHQ13203 477 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 PON3Q15166 354 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 BCL2A1Q16548 175 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 SGCBQ16585 318 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 GSTA3Q16772 222 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 ATAD3BQ5T9A4 648 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 TYW3Q6IPR3 259 aaKnown RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 VWA1Q6PCB0 445 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 MIER2Q8N344 545 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 GLB1L3Q8NCI6 653 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 FNDC9Q8TBE3 224 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 ZBTB8AQ96BR9 441 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-224ENST00000494132 ICAM5Q9UMF0 924 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 FBN2P35556 2912 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 AKAP6Q13023 2319 aa13.23□□□□□ -0.29
ATG4B-224ENST00000494132 A0A087WZY1 265 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 SERINC4A6NH21 518 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CLDN24A6NM45 220 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 TNFSF11O14788 317 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF264O43296 627 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 KIAA0513O60268 411 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 H6PDO95479 791 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ANP32DO95626 131 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 AK1P00568 194 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 IL6P05231 212 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms