RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, human

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-223	ENST00000494123	OPN1SW	P03999	348 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	RFPL3S	P0C7P2	107 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	MSX1	P28360	303 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	HTR1E	P28566	365 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	PRKAR1B	P31321	381 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	ZSWIM7	Q19AV6	140 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	HYAL4	Q2M3T9	481 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	NDUFAF6	Q330K2	333 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	EIPR1	Q53HC9	387 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	CCDC80	Q76M96	950 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	FAM109A	Q8N4B1	249 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	TMEM251	Q8N6I4	163 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	RASSF5	Q8WWW0	418 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	FAM162A	Q96A26	154 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	AGPAT4	Q9NRZ5	378 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	CD300A	Q9UGN4	299 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	EGFL7	Q9UHF1	273 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	DKKL1	Q9UK85	242 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	FBXL2	Q9UKC9	423 aa		13.27	□□□□□ -0.29
BRCA1-223	ENST00000494123	IGLV3-32	A0A0A0MS00	114 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	GCM2	O75603	506 aa	Predicted RBP	13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	MFN2	O95140	757 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	NCK1	P16333	377 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	PGM1	P36871	562 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	MAGEA5	P43359	124 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	P2RX1	P51575	399 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	CEACAM7	Q14002	265 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	RNFT1	Q5M7Z0	435 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	RNF220	Q5VTB9	566 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	CBLN3	Q6UW01	205 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	FADS6	Q8N9I5	356 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	SMYD1	Q8NB12	490 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	TOR1AIP2	Q8NFQ8	470 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	OR2M3	Q8NG83	312 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	MCUR1	Q96AQ8	359 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	SNRNP40	Q96DI7	357 aa	Known RBP	13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	LAT2	Q9GZY6	243 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	OLAH	Q9NV23	265 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	KLHL28	Q9NXS3	571 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	HRH3	Q9Y5N1	445 aa		13.26	□□□□□ -0.29
BRCA1-223	ENST00000494123	CDHR4	A6H8M9	788 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	FAM47E-STBD1	D6RA91	191 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	OIP5	O43482	229 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DNAJC8	O75937	253 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	PDE5A	O76074	875 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	GGT1	P19440	569 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	ME2	P23368	584 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DPP4	P27487	766 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	KDELR2	P33947	212 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	MSX2	P35548	267 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	ZNF41	P51814	821 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	MLLT10	P55197	1068 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DSCR4	P56555	118 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	EEF1A1	P68104	462 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DMTN	Q08495	405 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	BNIP2	Q12982	314 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	SKP2	Q13309	424 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	PRR30	Q53SZ7	412 aa	Predicted RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	GLYAT	Q6IB77	296 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DHRS4L2	Q6PKH6	230 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	FAR1	Q8WVX9	515 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	CNOT9	Q92600	299 aa	Known RBP	13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	TAMM41	Q96BW9	452 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	PINK1	Q9BXM7	581 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	DEFB127	Q9H1M4	99 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	UBQLN3	Q9H347	655 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	ASF1B	Q9NVP2	202 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	RLIM	Q9NVW2	624 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	QPCTL	Q9NXS2	382 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	MAGEL2	Q9UJ55	1249 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	NTNG1	Q9Y2I2	539 aa		13.25	□□□□□ -0.29
BRCA1-223	ENST00000494123	ANKUB1	A6NFN9	424 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	NPIPA5	E9PKD4	350 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	CDC40	O60508	579 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	PRB1	P04280	392 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	SRD5A2	P31213	254 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	SUMO3	P55854	103 aa	Predicted RBP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	CBFB	Q13951	182 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	GANAB	Q14697	944 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	SLC10A1	Q14973	349 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	ZNF440	Q8IYI8	595 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	CLIP4	Q8N3C7	705 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	FAM71C	Q8NEG0	241 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	OR5W2	Q8NH69	310 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	OR14L1P	Q8NHC6	308 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	CPT1C	Q8TCG5	803 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	NR4A3	Q92570	626 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	LDAH	Q9H6V9	325 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	EXOSC3	Q9NQT5	275 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	ADPRHL2	Q9NX46	363 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	DNAJB12	Q9NXW2	375 aa	Known RBP	13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	ICAM5	Q9UMF0	924 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	NPIPA1	Q9UND3	350 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	VDAC3	Q9Y277	283 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123	NCKAP5	O14513	1909 aa		13.24	□□□□□ -0.29
BRCA1-223	ENST00000494123		B4DXG7	233 aa		13.24	□□□□□ -0.29

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