RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 KDM7AQ6ZMT4 941 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 LRRC8AQ8IWT6 810 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 CD302Q8IX05 232 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 MCOLN2Q8IZK6 566 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 ELMOD1Q8N336 334 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 C8orf46Q8TAG6 207 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 KIAA1524Q8TCG1 905 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 PCNPQ8WW12 178 aaKnown RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 DNASE1L2Q92874 299 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 NT5C3BQ969T7 300 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 ANKRD36BP1Q96IX9 119 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 ANKRD27Q96NW4 1050 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 DUSP16Q9BY84 665 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 SLITRK2Q9H156 845 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 MTIF3Q9H2K0 278 aaKnown RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 VIPAS39Q9H9C1 493 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 NHEJ1Q9H9Q4 299 aaPredicted RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 HPS4Q9NQG7 708 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 PIGVQ9NUD9 493 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 B4GALT7Q9UBV7 327 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 GIMAP2Q9UG22 337 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 CDH9Q9ULB4 789 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 MGAT4AQ9UM21 535 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 PACSIN2Q9UNF0 486 aaPredicted RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 NAALAD2Q9Y3Q0 740 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 HBS1LQ9Y450 684 aaKnown RBP2.77□□□□□ -1.97
CD46-217ENST00000493796 SLCO1B1Q9Y6L6 691 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 SDK1Q7Z5N4 2213 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 LOC400499M0QZD8 3231 aa2.77□□□□□ -1.97
CD46-217ENST00000493796 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 SF3B1O75533 1304 aaKnown RBP eCLIP2.76□□□□□ -1.97
CD46-217ENST00000493796 TRAV34A0A0B4J273 112 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 LOC730098B7Z3J9 87 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 WASH3PC4AMC7 463 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 H0YCG3 227 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 GOLGA8SH3BPF8 625 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 M0QYV0 167 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 HSPA4LO95757 839 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 OAS1P00973 400 aaKnown RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 IGLV3-27P01718 113 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 RLN1P04808 185 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 CISD3P0C7P0 127 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 KRT13P13646 458 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 SPRP35270 261 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 NPBWR1P48145 328 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 SLC1A6P48664 564 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 TKTL1P51854 596 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 MRPS25P82663 173 aaKnown RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 ADIGQ0VDE8 80 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 PLD1Q13393 1074 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 TRADDQ15628 312 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 CFAP221Q4G0U5 840 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 VWA2Q5GFL6 755 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 LINC00242Q5T6M2 205 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 ZNF776Q68DI1 518 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 RFWD3Q6PCD5 774 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 CCBE1Q6UXH8 406 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 FAM47EQ6ZV65 393 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 NUFIP2Q7Z417 695 aaKnown RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 TAC4Q86UU9 113 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 NLRP14Q86W24 1093 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 VSIG1Q86XK7 387 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 TMEM25Q86YD3 366 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 PHF13Q86YI8 300 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 DEFB106AQ8N104 65 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 CNPY4Q8N129 248 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 GOLGA5Q8TBA6 731 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 URGCPQ8TCY9 931 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 DQX1Q8TE96 717 aaKnown RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 RAPGEF5Q92565 580 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 FGF13Q92913 245 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 PSMG2Q969U7 264 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 SYAP1Q96A49 352 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 SPATA17Q96L03 361 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 NPY6RQ99463 290 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 TSG101Q99816 390 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 C11orf70Q9BRQ4 267 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 ATG101Q9BSB4 218 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 LHX5Q9H2C1 402 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 LIME1Q9H400 295 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 UBE2ZQ9H832 354 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 CYP3A43Q9HB55 503 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 S100A14Q9HCY8 104 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 RRAGDQ9NQL2 400 aaPredicted RBP2.76□□□□□ -1.97
CD46-217ENST00000493796 SH3GLB1Q9Y371 365 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 CPQQ9Y646 472 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 POMT1Q9Y6A1 747 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 KIF25-AS1Q9Y6Z4 181 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 NBEAQ8NFP9 2946 aa2.76□□□□□ -1.97
CD46-217ENST00000493796 COL27A1Q8IZC6 1860 aaPredicted RBP2.75□□□□□ -1.97
CD46-217ENST00000493796 TDRD6O60522 2096 aaKnown RBP2.75□□□□□ -1.97
CD46-217ENST00000493796 DMXL2Q8TDJ6 3036 aa2.75□□□□□ -1.97
CD46-217ENST00000493796 CUL9Q8IWT3 2517 aa2.75□□□□□ -1.97
CD46-217ENST00000493796 LAMA5O15230 3695 aa2.75□□□□□ -1.97
CD46-217ENST00000493796 TEX48A0A1B0GUV7 120 aa2.75□□□□□ -1.97
CD46-217ENST00000493796 CCDC162PA2VCL2 907 aa2.75□□□□□ -1.97
CD46-217ENST00000493796 SRRM4A7MD48 611 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms