RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SLC19A2O60779 497 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 SOX30O94993 753 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 NR2F1P10589 423 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 AGAP20933 346 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ME2P23368 584 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 RFX3P48380 749 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 SMSP52788 366 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 MVDP53602 400 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 DCAF7P61962 342 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 PSPHP78330 225 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ALDH6A1Q02252 535 aaKnown RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 OC90Q02509 493 aaPredicted RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 GNA13Q14344 377 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 TESK1Q15569 626 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 OR1C1Q15619 314 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 DUSP5Q16690 384 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ZNF630Q2M218 657 aaPredicted RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 SPATS1Q496A3 300 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 GPAT3Q53EU6 434 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ERICH5Q6P6B1 374 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ASRGL1Q7L266 308 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 MRGPRGQ86SM5 289 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 EID3Q8N140 333 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 FBXW8Q8N3Y1 598 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 SLC16A11Q8NCK7 471 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 APCDD1LQ8NCL9 501 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 C11orf65Q8NCR3 313 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 OR8K3Q8NH51 312 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 CDS1Q92903 461 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 MAL2Q969L2 176 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 SCMH1Q96GD3 660 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 CCDC120Q96HB5 630 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 LCORQ96JN0 433 aaPredicted RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 GPR137Q96N19 417 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 PIGUQ9H490 435 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 CACYBPQ9HB71 228 aaKnown RBP11.13□□□□□ -0.63
UPF3A-210ENST00000493727 ANGPT4Q9Y264 503 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 DTX4Q9Y2E6 619 aa11.13□□□□□ -0.63
UPF3A-210ENST00000493727 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 FRG2CA6NGY1 282 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NKX2-2O95096 273 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 AK1P00568 194 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 BCHEP06276 602 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 FOSL1P15407 271 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 ATP6V1C1P21283 382 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 KRT20P35900 424 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 CD96P40200 585 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 PPICP45877 212 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 MAN2A2P49641 1150 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 GPR143P51810 404 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NR0B1P51843 470 aaKnown RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NRG3P56975 720 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 CORO7P57737 925 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 RNF4P78317 190 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 POU6F2P78424 691 aaPredicted RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 CDK6Q00534 326 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 RBBP4Q09028 425 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 BNIP2Q12982 314 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 CEACAM7Q14002 265 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 SCARB2Q14108 478 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 PIGGQ5H8A4 983 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NPSR1Q6W5P4 371 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 CALHM3Q86XJ0 350 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 SLC30A8Q8IWU4 369 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 ZZZ3Q8IYH5 903 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 MICU2Q8IYU8 434 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 C10orf111Q8N326 155 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 FAM156AQ8NDB6 213 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NFKBIDQ8NI38 313 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NUBPLQ8TB37 319 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 PIK3R3Q92569 461 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 SLC35A4Q96G79 324 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 ZNF583Q96ND8 569 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 BTBD9Q96Q07 612 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 BTBD2Q9BX70 525 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 NXF5Q9H1B4 397 aaKnown RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 KLHL1Q9NR64 748 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 DUSP22Q9NRW4 184 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 LRFN1Q9P244 771 aa11.12□□□□□ -0.63
UPF3A-210ENST00000493727 ZNF223Q9UK11 482 aaPredicted RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 MRTO4Q9UKD2 239 aaKnown RBP11.12□□□□□ -0.63
UPF3A-210ENST00000493727 DNAJC13O75165 2243 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 GXYLT2A0PJZ3 443 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 CFAP73A6NFT4 308 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 A8MVJ9 347 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 ACOX3O15254 700 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 PRKNO60260 465 aaPredicted RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 BPNT1O95861 308 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 SP1P08047 785 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 HSD17B1P14061 328 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
UPF3A-210ENST00000493727 HTR1EP28566 365 aa11.11□□□□□ -0.63
UPF3A-210ENST00000493727 IL12BP29460 328 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms