RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 LAT2Q9GZY6 243 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 PCDHAC1Q9H158 963 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 PPP4R1LQ9P1A2 415 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 KCNE5Q9UJ90 142 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 BOKQ9UMX3 212 aaPredicted RBP11.37□□□□□ -0.59
SNX17-208ENST00000493711 WIF1Q9Y5W5 379 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 KALRNO60229 2985 aa11.37□□□□□ -0.59
SNX17-208ENST00000493711 NPIPA5A0A0B4J1W7 369 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 CDHR4A6H8M9 788 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 NPIPA7E9PJI5 369 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 ZNF264O43296 627 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 SCO2O43819 266 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 PEX1O43933 1283 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 ZNF682O95780 498 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 LGI1O95970 557 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 FESP07332 822 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 NPIPA8P0DM63 369 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 MSX2P35548 267 aaPredicted RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 MASP1P48740 699 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 GAS1P54826 345 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 EEF1A1P68104 462 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 MS4A2Q01362 244 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 DMTNQ08495 405 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 ZNF169Q14929 603 aaPredicted RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 LINC00303Q3SY05 128 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 MRPL2Q5T653 305 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 FNDC7Q5VTL7 733 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 Q6ZS92 163 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 FKBP9P1Q75LS8 142 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 OLIG3Q7RTU3 272 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 MDGA2Q7Z553 956 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 VRK2Q86Y07 508 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 SPPL2CQ8IUH8 684 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 DUSP19Q8WTR2 217 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 QRSL1Q9H0R6 528 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 PTGES2Q9H7Z7 377 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
SNX17-208ENST00000493711 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
SNX17-208ENST00000493711 FAM47E-STBD1D6RA91 191 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 FAAHO00519 579 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 HCRTR2O43614 444 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 TRIM3O75382 744 aaPredicted RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 CBR3O75828 277 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 GPIP06744 558 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 ITGA2P17301 1181 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 CD247P20963 164 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 IFNA8P32881 189 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 MMP16P51512 607 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 P2RX1P51575 399 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 C19orf57Q0VDD7 668 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 GANABQ14697 944 aaKnown RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 FAM98BQ52LJ0 330 aaKnown RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 IFI44LQ53G44 452 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 PRAMEF20Q5VT98 475 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 TIGD3Q6B0B8 471 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 APOOLQ6UXV4 268 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 ZNF836Q6ZNA1 936 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 RANBP3LQ86VV4 465 aaPredicted RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 PLCZ1Q86YW0 608 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 FAM71CQ8NEG0 241 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 OR2M7Q8NG81 312 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 OR4K17Q8NGC6 315 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 OR1J4Q8NGS1 313 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 B4GALNT2Q8NHY0 566 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 NR4A3Q92570 626 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 UTP4Q969X6 686 aaKnown RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 PYURFQ96I23 114 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 TPD52L3Q96J77 140 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 POLR2J2Q9GZM3 115 aaKnown RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 POLR2J3Q9H1A7 115 aaKnown RBP11.35□□□□□ -0.59
SNX17-208ENST00000493711 MAGIXQ9H6Y5 334 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 YY1AP1Q9H869 796 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 ZFP64Q9NPA5 681 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 QPCTLQ9NXS2 382 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 FLRT3Q9NZU0 649 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 B3GNT3Q9Y2A9 372 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 TP53TG5Q9Y2B4 290 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 CROCCQ5TZA2 2017 aa11.35□□□□□ -0.59
SNX17-208ENST00000493711 A0A087WZY1 265 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 CENPVL1A0A0U1RR11 272 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 ACOT7O00154 380 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 FMO6PO60774 539 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 F10P00742 488 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 OPN1SWP03999 348 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
SNX17-208ENST00000493711 PGCP20142 388 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 ATP6V1B2P21281 511 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 PSMA4P25789 261 aaKnown RBP11.34□□□□□ -0.59
SNX17-208ENST00000493711 PTGDSP41222 190 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 CRYBA2P53672 197 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 RGS8P57771 180 aaPredicted RBP11.34□□□□□ -0.59
SNX17-208ENST00000493711 COPZ1P61923 177 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 SKP2Q13309 424 aa11.34□□□□□ -0.59
SNX17-208ENST00000493711 CBFBQ13951 182 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms