RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RAB5AP20339 215 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SHC1P29353 583 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MATKP42679 507 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CDH11P55287 796 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 GAB1Q13480 694 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 BOP1Q14137 746 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 FAM174BQ3ZCQ3 159 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 UNC50Q53HI1 259 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM201Q5SNT2 666 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF678Q5SXM1 525 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TRNP1Q6NT89 227 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM108Q6UXF1 575 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CYHR1Q6ZMK1 362 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR2W3Q7Z3T1 314 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZBTB8OSQ8IWT0 167 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 DBF4BQ8NFT6 615 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR8J3Q8NGG0 315 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR56A4Q8NGH8 313 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR10R2Q8NGX6 335 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF461Q8TAF7 563 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MTERF1Q99551 399 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PITX2Q99697 317 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ADAM2Q99965 735 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 C16orf70Q9BSU1 422 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TUBB1Q9H4B7 451 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CA10Q9NS85 328 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CISHQ9NSE2 258 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 GPR34Q9UPC5 381 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NOD1Q9Y239 953 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 A0A087WZY1 265 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 C2orf92A0A1B0GVN3 265 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ANKRD61A6NGH8 418 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 GABRR3A8MPY1 467 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MCIDASD6RGH6 385 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SULT2B1O00204 365 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MED7O43513 233 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SLC28A2O43868 658 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SLC25A12O75746 678 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 AQP8O94778 261 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MLYCDO95822 493 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 DAOP14920 347 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MAPK3P27361 379 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CTGFP29279 349 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NKX6-1P78426 367 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 VLDLRP98155 873 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SPIBQ01892 262 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 EGR3Q06889 387 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF674Q2M3X9 581 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 INTS6LQ5JSJ4 861 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ATPAF1Q5TC12 328 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SPRYD7Q5W111 196 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZFAND4Q86XD8 727 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 FAM26EQ8N5C1 309 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR56B2PQ8NGI1 322 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 UBA3Q8TBC4 463 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 EDEM1Q92611 657 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OSTF1Q92882 214 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZBTB45Q96K62 511 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ADAD1Q96M93 576 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ELOVL1Q9BW60 279 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CDCA4Q9BXL8 241 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 DPY30Q9C005 99 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 FAM124BQ9H5Z6 455 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MYOZ1Q9NP98 299 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ACKR4Q9NPB9 350 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TDP1Q9NUW8 608 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 RNF19AQ9NV58 838 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SAGE1Q9NXZ1 904 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 RASL12Q9NYN1 266 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 LUZP4Q9P127 313 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TRPC4Q9UBN4 977 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 KIF26AQ9ULI4 1882 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 LOC100509620A0A075B734 347 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 TRAPPC13A5PLN9 417 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 HAS3O00219 553 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR4F21O95013 312 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 PLGP00747 810 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MBPP02686 304 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 HIST1H2ABP04908 130 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 FOLR2P14207 255 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CPN1P15169 458 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MYOGP15173 224 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 BMP7P18075 431 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 NOS2P35228 1153 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 MNDAP41218 407 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CDX1P47902 265 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-205ENST00000493587 LHX1P48742 406 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 EPHA4P54764 986 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 CDH12P55289 794 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 SP4Q02446 784 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF234Q14588 700 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 C14orf28Q4W4Y0 310 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 AFMIDQ63HM1 303 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR4F3Q6IEY1 312 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 OR2A2Q6IF42 318 aa6.42□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF529Q6P280 563 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms