RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FAM98AQ8NCA5 519 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 FAM71CQ8NEG0 241 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 OR10H4Q8NGA5 316 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 OR52I2Q8NH67 350 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 SCAMP4Q969E2 229 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ELP4Q96EB1 424 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 TMPRSS13Q9BYE2 586 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CAMK2AQ9UQM7 478 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 DAPL1A0PJW8 107 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 COCHO43405 550 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ZDHHC11BP0C7U3 371 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 RPL3P39023 403 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 KCNJ3P48549 501 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CNTN1Q12860 1018 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 COL9A2Q14055 689 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 LINC00303Q3SY05 128 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 RSPO2Q6UXX9 243 aaPredicted RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 TPRA1Q86W33 373 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CBLN2Q8IUK8 224 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 KAT2AQ92830 837 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 SLC25A28Q96A46 364 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 CMSS1Q9BQ75 279 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ANKRD19PQ9H560 264 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 TRIM36Q9NQ86 728 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
HDAC4-210ENST00000493582 NDRG3Q9UGV2 375 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 KCNK7Q9Y2U2 307 aa10.91□□□□□ -0.66
HDAC4-210ENST00000493582 IGLV3-16A0A075B6K0 115 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CARNS1A5YM72 827 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 ANTXRLA6NF34 631 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.66
HDAC4-210ENST00000493582 FMO6PO60774 539 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 AKR1C2P52895 323 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 TAS2R41P59536 307 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 TSPAN31Q12999 210 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 UBXN2BQ14CS0 331 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CHST9Q7L1S5 443 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF671Q8TAW3 534 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 THEM6Q8WUY1 208 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 PRRC1Q96M27 445 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 UROC1Q96N76 676 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 TTTY10Q9BZA0 68 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 AK6Q9Y3D8 172 aaKnown RBP10.9□□□□□ -0.66
HDAC4-210ENST00000493582 PLXND1Q9Y4D7 1925 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 J3QLW9 94 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 VNN2O95498 520 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 MRPL3P09001 348 aaKnown RBP10.9□□□□□ -0.66
HDAC4-210ENST00000493582 EPXP11678 715 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CPN1P15169 458 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF19P17023 458 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 ACHEP22303 614 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 SLC16A1P53985 500 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 TNFRSF17Q02223 184 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 SLC6A19Q695T7 634 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 OR7E24Q6IFN5 339 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 HEPHL1Q6MZM0 1159 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CXXC5Q7LFL8 322 aaKnown RBP10.9□□□□□ -0.66
HDAC4-210ENST00000493582 TMPRSS9Q7Z410 1059 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 CMTM4Q8IZR5 234 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 ZFP82Q8N141 532 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 EXOSC8Q96B26 276 aaKnown RBP10.9□□□□□ -0.66
HDAC4-210ENST00000493582 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
HDAC4-210ENST00000493582 H0YC42 278 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 J3QRE1 110 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 RASGRP1O95267 797 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 RB1P06400 928 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 H2AFB1P0C5Y9 115 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 NPPBP16860 134 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 MAT1AQ00266 395 aaKnown RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF528Q3MIS6 628 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 FAM69AQ5T7M9 428 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 ZDHHC20Q5W0Z9 365 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 HAGHLQ6PII5 290 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 ZC3H14Q6PJT7 736 aaKnown RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 OR6V1Q8N148 313 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 LGALS14Q8TCE9 139 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 NTNG1Q9Y2I2 539 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 SCN8AQ9UQD0 1980 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 OR5F1O95221 314 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF35P13682 527 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 PDHA2P29803 388 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 GJA5P36382 358 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 PRKAG1P54619 331 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 NUMA1Q14980 2115 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 SWI5Q1ZZU3 235 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 GDF6Q6KF10 455 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-210ENST00000493582 HTR3DQ70Z44 454 aa10.89□□□□□ -0.67
HDAC4-210ENST00000493582 OR56A3Q8NH54 315 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms