RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MTX3Q5HYI7 312 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 ZNF836Q6ZNA1 936 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 CBLL1Q75N03 491 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.45
MSH6-208ENST00000493177 MARCH3Q86UD3 253 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 FJX1Q86VR8 437 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 OR10Q1Q8NGQ4 319 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 PHOSPHO1Q8TCT1 267 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 RASSF5Q8WWW0 418 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 LZICQ8WZA0 190 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
MSH6-208ENST00000493177 SGCZQ96LD1 299 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 ARMC7Q9H6L4 198 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 TIMMDC1Q9NPL8 285 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 KCNE5Q9UJ90 142 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 DTNAQ9Y4J8 743 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 TENM4Q6N022 2769 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 A0A1B0GUH1 482 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 SERINC4A6NH21 518 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 NPIPB9F8W1W9 429 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 GTPBP1O00178 669 aaKnown RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 CYP7B1O75881 506 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 THBS1P07996 1170 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 PRKAR1BP31321 381 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 EIPR1Q53HC9 387 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 PRAMEF20Q5VT98 475 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 C1QL3Q5VWW1 255 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 SLC22A10Q63ZE4 541 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 BICRALQ6AI39 1079 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 FKBP9P1Q75LS8 142 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 EIF3MQ7L2H7 374 aaKnown RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 EID3Q8N140 333 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 POGLUT1Q8NBL1 392 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 PROX1Q92786 737 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 SCMH1Q96GD3 660 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 OSBPL11Q9BXB4 747 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 PINK1Q9BXM7 581 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 SACM1LQ9NTJ5 587 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 DCAF13Q9NV06 445 aaKnown RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 KLHL28Q9NXS3 571 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 PLEKHB1Q9UF11 243 aaPredicted RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 BAG5Q9UL15 447 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 ABCG2Q9UNQ0 655 aa12.26□□□□□ -0.45
MSH6-208ENST00000493177 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
MSH6-208ENST00000493177 AQP12BA6NM10 295 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CLDN24A6NM45 220 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 G3V3Y1 287 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 KLRC4-KLRK1H3BQV0 150 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NDUFB5O43674 189 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NME2P1O60361 137 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 FADS1O60427 444 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 TPST1O60507 370 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NEURL1O76050 574 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 PRKD3O94806 890 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 ANGPTL1O95841 491 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CSTAP01040 98 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NGFRP08138 427 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CCL3P10147 92 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 NID1P14543 1247 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 ZNF24P17028 368 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CD247P20963 164 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 RPS4Y1P22090 263 aaKnown RBP12.25□□□□□ -0.45
MSH6-208ENST00000493177 NME2P22392 152 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 MST1P26927 711 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 KCNJ5P48544 419 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 TDGF1P3P51864 188 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CRYBA2P53672 197 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 SELENOWP63302 87 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 KCNJ10P78508 379 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 FGFBP1Q14512 234 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 DUSP7Q16829 419 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 KLHL26Q53HC5 615 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 MRPL2Q5T653 305 aaKnown RBP12.25□□□□□ -0.45
MSH6-208ENST00000493177 DHRS4L2Q6PKH6 230 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 ENPP6Q6UWR7 440 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 MDGA2Q7Z553 956 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 AQP12AQ8IXF9 295 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 TMCO5AQ8N6Q1 288 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 GOLM1Q8NBJ4 401 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 OR52E4Q8NGH9 312 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 PAQR8Q8TEZ7 354 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 OIT3Q8WWZ8 545 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 HSH2DQ96JZ2 352 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 SECISBP2Q96T21 854 aaKnown RBP12.25□□□□□ -0.45
MSH6-208ENST00000493177 SEPHS2Q99611 448 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 SDHAF3Q9NRP4 125 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CNIH4Q9P003 139 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CNOT11Q9UKZ1 510 aaKnown RBP12.25□□□□□ -0.45
MSH6-208ENST00000493177 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
MSH6-208ENST00000493177 CHCHD2Q9Y6H1 151 aaPredicted RBP12.25□□□□□ -0.45
MSH6-208ENST00000493177 A0A1W2PQD3 144 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
MSH6-208ENST00000493177 ALG1L2C9J202 215 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms