RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 RIPPLY1Q0D2K3 151 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 GPR50Q13585 617 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 CTSL3PQ5NE16 218 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 TRUB1Q8WWH5 349 aaKnown RBP12.8□□□□□ -0.36
TRIM11-204ENST00000493030 EGLN2Q96KS0 407 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 INIPQ9NRY2 104 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 HOXD9P28356 352 aaPredicted RBP12.8□□□□□ -0.36
TRIM11-204ENST00000493030 NOVP48745 357 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 CAMLGP49069 296 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 PRLHRP49683 370 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 CHRNEQ04844 493 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 NFATC4Q14934 902 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 VRK2Q86Y07 508 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 PAPD5Q8NDF8 572 aaKnown RBP12.8□□□□□ -0.36
TRIM11-204ENST00000493030 CHFRQ96EP1 664 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 CSNK1G1Q9HCP0 422 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 FAIMQ9NVQ4 179 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 EFCAB7A8K855 629 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 SERPINA11Q86U17 422 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 PRRC1Q96M27 445 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 C3orf30Q96M34 536 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 OR7D2Q96RA2 312 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 INTS14Q96SY0 518 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 TMEM181Q9P2C4 612 aa12.8□□□□□ -0.36
TRIM11-204ENST00000493030 LSM5Q9Y4Y9 91 aaKnown RBP12.8□□□□□ -0.36
TRIM11-204ENST00000493030 LRP6O75581 1613 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 NSG1A0A0A6YYJ2 146 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CHRM4P08173 479 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 C1SP09871 688 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CDK2P24941 298 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 AOAHP28039 575 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CAV2P51636 162 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ZP2Q05996 745 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SACM1LQ9NTJ5 587 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 POLHQ9Y253 713 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 MEIS3P1A6NDR6 274 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 DBHP09172 617 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 AQP2P41181 271 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CXCR4P61073 352 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SERPINA12Q8IW75 414 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 TIMM29Q9BSF4 260 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 DDX31Q9H8H2 851 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 FOLH1BQ9HBA9 442 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 B3GNT2Q9NY97 397 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CITO14578 2027 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SLC16A7O60669 478 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ZNF14P17017 642 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 GABRR1P24046 479 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ADARB1P78563 741 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 RAB41Q5JT25 222 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 C9orf135Q5VTT2 229 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SLC22A10Q63ZE4 541 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 IL20RBQ6UXL0 311 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ABHD12BQ7Z5M8 362 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ANKRD13BQ86YJ7 626 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CCDC32Q9BV29 185 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 TXLNGYQ9BZA5 131 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SAP130Q9H0E3 1048 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 APOC3P02656 99 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 HOXC13P31276 330 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 DCP2Q8IU60 420 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 METTL25Q8N6Q8 603 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ASB11Q8WXH4 323 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 INSM2Q96T92 566 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 USP3Q9Y6I4 520 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CER1O95813 267 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CD53P19397 219 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 MAT1AQ00266 395 aaKnown RBP12.79□□□□□ -0.36
TRIM11-204ENST00000493030 SF3B4Q15427 424 aaKnown RBP eCLIP12.79□□□□□ -0.363e-7■■□□□ 14.3
TRIM11-204ENST00000493030 RPE65Q16518 533 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 TMEM53Q6P2H8 277 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CMTM1Q8IZ96 169 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 CCDC71LQ8N9Z2 235 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ADAMTS16Q8TE57 1224 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 ENKD1Q9H0I2 346 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 APMAPQ9HDC9 416 aa12.79□□□□□ -0.36
TRIM11-204ENST00000493030 WDPCPO95876 746 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 DHRS4L1P0CG22 281 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 CPMP14384 443 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 IDUAP35475 653 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 AHRP35869 848 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 ENTPD8Q5MY95 495 aa12.78□□□□□ -0.36
TRIM11-204ENST00000493030 B3GNT9Q6UX72 402 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms