RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 EXO1Q9UQ84 846 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ERVK-11Q9UQG0 969 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CCL26Q9Y258 94 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ORC6Q9Y5N6 252 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 HEMK1Q9Y5R4 338 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 CEP350Q5VT06 3117 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 SCN5AQ14524 2016 aa3.53□□□□□ -1.84
ATPAF1-206ENST00000492233 ZFC3H1O60293 1989 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 BPTFQ12830 3046 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LTBP2Q14767 1821 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 DNAH12Q6ZR08 3092 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LOC105369274A0A096LPK9 316 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LOC102723532A0A0G2JNH3 316 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM202A6NGA9 273 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM221A6NGB7 291 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ANKRD61A6NGH8 418 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MBD3L5A6NJ08 208 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 OR2AG2A6NM03 316 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GABRR3A8MPY1 467 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF99A8MXY4 864 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMX2-CTNND1H3BSU7 103 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF197O14709 1029 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SLC9A3R1O14745 358 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 POLR1CO15160 346 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 KCNAB3O43448 404 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GLCEO94923 617 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 KDM4BO94953 1096 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 C1orf105O95561 183 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ETHE1O95571 254 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CPSF4O95639 269 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF682O95780 498 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ANGPTL1O95841 491 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SOD1P00441 154 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MBP02144 154 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 C1QCP02747 245 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 C9P02748 559 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ANXA4P09525 319 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LAMP1P11279 417 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ADH5P11766 374 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF12P17014 697 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CEBPBP17676 345 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TNNI3P19429 210 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MSR1P21757 451 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CD72P21854 359 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 AZGP1P25311 298 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 APEX1P27695 318 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 DLSTP36957 453 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 HPCAL1P37235 193 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 RPL3P39023 403 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 BDKRB1P46663 353 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 POU3F4P49335 361 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CLK3P49761 638 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GDI2P50395 445 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 BCAP31P51572 246 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 DGKEP52429 567 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MVDP53602 400 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CRYBA2P53672 197 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 PLA2G16P53816 162 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GP2P55259 537 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 RPL15P61313 204 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 RPS13P62277 151 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SLC35A2P78381 396 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 VLDLRP98155 873 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 IL5RAQ01344 420 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 BNC1Q01954 994 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 RBBP4Q09028 425 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF763Q0D2J5 394 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 FCHO2Q0JRZ9 810 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GAB1Q13480 694 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 AQP6Q13520 282 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 GPR176Q14439 515 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 RGNQ15493 299 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SSX2Q16385 188 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CCSMST1Q4G0I0 132 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM52BQ4KMG9 183 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SYTL3Q4VX76 610 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF385BQ569K4 471 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 C19orf54Q5BKX5 351 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM196Q5HYL7 178 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 EMC4Q5J8M3 183 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LRRC73Q5JTD7 316 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LY6G5CQ5SRR4 150 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF648Q5T619 568 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SYT6Q5T7P8 510 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 CPTPQ5TA50 214 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MLIPQ5VWP3 458 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 HLA-DQA1Q5Y7H0 255 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 LAIR1Q6GTX8 287 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM211Q6ICI0 200 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 FAM71E1Q6IPT2 247 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 MED27Q6P2C8 311 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TMEM220Q6QAJ8 160 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 SLC16A12Q6ZSM3 486 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 ZNF621Q6ZSS3 439 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 NCCRP1Q6ZVX7 275 aaPredicted RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 TSEN54Q7Z6J9 526 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 VTCN1Q7Z7D3 282 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 B3GNT8Q7Z7M8 397 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 HORMAD1Q86X24 394 aa3.52□□□□□ -1.85
ATPAF1-206ENST00000492233 WFDC3Q8IUB2 231 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms