RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 EBPLQ9BY08 206 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 TRIM2Q9C040 744 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 TMEM185BQ9H7F4 350 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 SSU72Q9NP77 194 aaKnown RBP12.87□□□□□ -0.35
SSR4-212ENST00000491833 TMEM160Q9NX00 188 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 LPAR3Q9UBY5 353 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
SSR4-212ENST00000491833 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 C7orf72A4D263 438 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 MYO1GB0I1T2 1018 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 UPK1AO00322 258 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 TM9SF1O15321 606 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 SSX4O60224 188 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 OPN1LWP04000 364 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CHN1P15882 459 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 DDCP20711 480 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 HMOX2P30519 316 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CASP9P55211 416 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CDH11P55287 796 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
SSR4-212ENST00000491833 ZNF763Q0D2J5 394 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 ZNF239Q16600 458 aaKnown RBP12.86□□□□□ -0.35
SSR4-212ENST00000491833 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 HHATQ5VTY9 493 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 APOOLQ6UXV4 268 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 ATG4DQ86TL0 474 aaPredicted RBP12.86□□□□□ -0.35
SSR4-212ENST00000491833 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 RNF128Q8TEB7 428 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 APIPQ96GX9 242 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
SSR4-212ENST00000491833 ACPTQ9BZG2 426 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 MIEF1Q9NQG6 463 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 CISD1Q9NZ45 108 aaKnown RBP12.86□□□□□ -0.35
SSR4-212ENST00000491833 EMCNQ9ULC0 261 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 PRR14LQ5THK1 2151 aa12.86□□□□□ -0.35
SSR4-212ENST00000491833 A0A096LNT2 108 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 A0A0J9YW62 118 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 A0A1W2PRB8 838 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 NDUFB5O43674 189 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 ULK1O75385 1050 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 CD8AP01732 235 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 VLDLRP98155 873 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 CLCQ05315 142 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 RNPS1Q15287 305 aaKnown RBP12.85□□□□□ -0.35
SSR4-212ENST00000491833 PLPPR5Q32ZL2 321 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 LIPMQ5VYY2 423 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
SSR4-212ENST00000491833 PIWIL2Q8TC59 973 aaKnown RBP12.85□□□□□ -0.35
SSR4-212ENST00000491833 MGARPQ8TDB4 240 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 ABHD3Q8WU67 409 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 CPNE4Q96A23 557 aaPredicted RBP12.85□□□□□ -0.35
SSR4-212ENST00000491833 ATP6V1G3Q96LB4 118 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
SSR4-212ENST00000491833 TMEM237Q96Q45 408 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 NPAS1Q99742 590 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 MED17Q9NVC6 651 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 SLC17A7Q9P2U7 560 aa12.85□□□□□ -0.35
SSR4-212ENST00000491833 FAM234BA2RU67 622 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 HMGB1P1B2RPK0 211 aaPredicted RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 OXSR1O95747 527 aaPredicted RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 ADAP00813 363 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 ANXA4P09525 319 aaPredicted RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 HTR6P50406 440 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 PRKAA2P54646 552 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 DSCR9P59020 149 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 ITGADQ13349 1161 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 PCLAFQ15004 111 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 ZNF678Q5SXM1 525 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 CPTPQ5TA50 214 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 AGAP6Q5VW22 663 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 GALNT18Q6P9A2 607 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 GATSQ8NAP1 163 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 PIK3R3Q92569 461 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 OSTF1Q92882 214 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 L3HYPDHQ96EM0 354 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 ZNF382Q96SR6 550 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 SHARPINQ9H0F6 387 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 C12orf65Q9H3J6 166 aaKnown RBP12.84□□□□□ -0.35
SSR4-212ENST00000491833 GLIPR2Q9H4G4 154 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 TIGARQ9NQ88 270 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 B3GALT5Q9Y2C3 310 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 NBEAL1Q6ZS30 2694 aa12.84□□□□□ -0.35
SSR4-212ENST00000491833 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms