RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 COQ8BQ96D53 544 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 C1GALT1C1Q96EU7 318 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SH3YL1Q96HL8 342 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 METTL2AQ96IZ6 378 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CCT7Q99832 543 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SMR3AQ99954 134 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 TRMOQ9BU70 441 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 TMEM109Q9BVC6 243 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 RBM24Q9BX46 236 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 POLDIP3Q9BY77 421 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 IQCGQ9H095 443 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 OPN3Q9H1Y3 402 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 SERHL2Q9H4I8 314 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 Q9N2J8 555 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 PNPOQ9NVS9 261 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 FAM120CQ9NX05 1096 aaKnown RBP6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 GALNT8Q9NY28 637 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 MID2Q9UJV3 735 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 CLEC4AQ9UMR7 237 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 VDAC3Q9Y277 283 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 PLEKHA6Q9Y2H5 1048 aa6.58□□□□□ -1.36
PRPF4B-208ENST00000490653 ABCA4P78363 2273 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FBN1P35555 2871 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 A0A0J9YW62 118 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 A0A1W2PNV4 684 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 A6NNC1 897 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 A8MXE2 369 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FAM47E-STBD1D6RA91 191 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 SCAMP2O15127 329 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 NTN1O95631 604 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 IL18BPO95998 194 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CHEK2O96017 543 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CGAP01215 116 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 HMGN2P05204 90 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 NEFHP12036 1026 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 PEPDP12955 493 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 BGNP21810 368 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 PSMA4P25789 261 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 OPRM1P35372 400 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 SERPINB4P48594 390 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CCT3P49368 545 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 DIO3P55073 304 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 PRR5P85299 388 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 DAZAP2Q15038 168 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNHIT3Q15649 155 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CHI3L2Q15782 390 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 TOMM34Q15785 309 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 BCL2A1Q16548 175 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 KRT71Q3SY84 523 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FLYWCH1Q4VC44 716 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 TNFAIP8L3Q5GJ75 292 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 OR4F3Q6IEY1 312 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 EMBQ6PCB8 327 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 AAGABQ6PD74 315 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 P4HA3Q7Z4N8 544 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 GGNQ86UU5 652 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 GRAMD2AQ8IUY3 354 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 RIMKLAQ8IXN7 391 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CLECL1Q8IZS7 167 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CDRT4Q8N9R6 151 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FNDC5Q8NAU1 212 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 OR5AK3PQ8NH89 298 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 CEP70Q8NHQ1 597 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FNDC9Q8TBE3 224 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 FAM222BQ8WU58 562 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 OR5P2Q8WZ92 322 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 TUBGCP3Q96CW5 907 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ZBED6CLQ96FA7 236 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 PPP3R2Q96LZ3 170 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 WFIKKN1Q96NZ8 548 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ZIM3Q96PE6 472 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 SORT1Q99523 831 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 PINK1Q9BXM7 581 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 TBL1XR1Q9BZK7 514 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 EML4Q9HC35 981 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ACSS1Q9NUB1 689 aaPredicted RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 ZCCHC3Q9NUD5 404 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 SNX8Q9Y5X2 465 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 HEATR5AQ86XA9 2040 aa6.57□□□□□ -1.36
PRPF4B-208ENST00000490653 IGLV3-32A0A0A0MS00 114 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CENPVL1A0A0U1RR11 272 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 TUBAL3A6NHL2 446 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ALG1L2C9J202 215 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 C9JVG2 144 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 NDUFB5O43674 189 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CXCL13O43927 109 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF500O60304 480 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 SCN2BO60939 215 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 SLITRK5O94991 958 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 KCNH1O95259 989 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 HRGP04196 525 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 IFI6P09912 130 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 ALOX5P09917 674 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 DHRS4L1P0CG22 281 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 CD99P14209 185 aa6.56□□□□□ -1.36
PRPF4B-208ENST00000490653 KLK2P20151 261 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms