RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 KLHL13Q9P2N7 655 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 TBK1Q9UHD2 729 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ADAM21Q9UKJ8 722 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 RNF223E7ERA6 249 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 H3BNH8 94 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 KIF2AO00139 706 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 TBX19O60806 448 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 GCM2O75603 506 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 SOX30O94993 753 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 NTN1O95631 604 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 CHEK2O96017 543 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 PROCP04070 461 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 ATP6V1C1P21283 382 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 PRPH2P23942 346 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ASMTP46597 345 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 DNAJB13P59910 316 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 DUSP5Q16690 384 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ZNF385BQ569K4 471 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 NCMAPQ5T1S8 102 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 SFRP5Q5T4F7 317 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 CLEC6AQ6EIG7 209 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 HEPHL1Q6MZM0 1159 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 FCRLAQ7L513 359 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 R3HCC1LQ7Z5L2 792 aaKnown RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 ZAR1Q86SH2 424 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 IFT20Q8IY31 132 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 BANPQ8N9N5 519 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 CCDC63Q8NA47 563 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ZNF527Q8NB42 609 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 RAB3IL1Q8TBN0 382 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 POC1BQ8TC44 478 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 FAM110BQ8TC76 370 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 PHOSPHO1Q8TCT1 267 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ABHD3Q8WU67 409 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 HSD17B8Q92506 261 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 ZNF524Q96C55 264 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 GIMAP5Q96F15 307 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 TSSK3Q96PN8 268 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 USB1Q9BQ65 265 aaKnown RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 BTBD2Q9BX70 525 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 POTEKPQ9BYX7 375 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 ALG2Q9H553 416 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 GP6Q9HCN6 339 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 EMCNQ9ULC0 261 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 PTGDR2Q9Y5Y4 395 aa8.34□□□□□ -1.07
SNX17-207ENST00000489402 GPC6Q9Y625 555 aaPredicted RBP8.34□□□□□ -1.07
SNX17-207ENST00000489402 USF3Q68DE3 2245 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 NPIPB8E9PQR5 432 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 OVOL3O00110 214 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 PRKD3O94806 890 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 IFNA2P01563 188 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 LINGO3P0C6S8 592 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 SDC1P18827 310 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 ADH6P28332 368 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 CDKN1AP38936 164 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 FRKP42685 505 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 CCT5P48643 541 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 P2RX1P51575 399 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 SUMO3P55854 103 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 RPL38P63173 70 aaKnown RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 ZNF117Q03924 483 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 FOXF1Q12946 379 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 ITGADQ13349 1161 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 PDE7AQ13946 482 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 KIAA0040Q15053 153 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 P2RY6Q15077 328 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 TAB1Q15750 504 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 CD226Q15762 336 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 CCNJQ5T5M9 372 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 NUFIP2Q7Z417 695 aaKnown RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 ATG4DQ86TL0 474 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 TUSC5Q8IXB3 177 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 GABRG1Q8N1C3 465 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 ZNF619Q8N2I2 560 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 SLC43A2Q8N370 569 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 MAPK1IP1LQ8NDC0 245 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 CLHC1Q8NHS4 586 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 SMAP2Q8WU79 429 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 MTERF3Q96E29 417 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 OTUB1Q96FW1 271 aaPredicted RBP8.33□□□□□ -1.08
SNX17-207ENST00000489402 C16orf58Q96GQ5 468 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 STACQ99469 402 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 SRXN1Q9BYN0 137 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 REG4Q9BYZ8 158 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 HOXD1Q9GZZ0 328 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 L2HGDHQ9H9P8 463 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 DUSP22Q9NRW4 184 aa8.33□□□□□ -1.08
SNX17-207ENST00000489402 ZCCHC3Q9NUD5 404 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms