RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 OR8G2PQ6IF36 304 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 FAHD2BQ6P2I3 314 aaPredicted RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 CCBE1Q6UXH8 406 aaPredicted RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 GCNT7Q6ZNI0 430 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 CCDC80Q76M96 950 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 APTXQ7Z2E3 356 aaKnown RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 MOB3BQ86TA1 216 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 MYPOPQ86VE0 399 aaPredicted RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 ERICH1Q86X53 443 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 CLEC4FQ8N1N0 589 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 Q8N377 158 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 CSNK1G2-AS1Q8NCQ2 148 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 MAPK1IP1LQ8NDC0 245 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 OR2T33Q8NG76 320 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 OR10A7Q8NGE5 316 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 OR9A4Q8NGU2 314 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 FAHD2AQ96GK7 314 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 TM2D1Q9BX74 207 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 HCAR1Q9BXC0 346 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 NXF5Q9H1B4 397 aaKnown RBP3.4□□□□□ -1.87
XRN1-213ENST00000489241 ADNPQ9H2P0 1102 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 LRRN3Q9H3W5 708 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 GLIPR2Q9H4G4 154 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 METTL7AQ9H8H3 244 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 HEXA-AS1Q9H8Q6 139 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 SLC17A5Q9NRA2 495 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 EHFQ9NZC4 300 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 IL36GQ9NZH8 169 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 POLDIP2Q9Y2S7 368 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 OARD1Q9Y530 152 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 USP16Q9Y5T5 823 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 ALG6Q9Y672 507 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 A0A0U1RQS6 177 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 LRP5LA4QPB2 252 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 SAGE2PA6NJ88 616 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ZNF487B1APH4 448 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 H3BMQ9 156 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 FOXE1O00358 373 aaPredicted RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 NBR2O15453 112 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TAPBPO15533 448 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ZNF264O43296 627 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TSC22D2O75157 780 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 LRATO95237 230 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 HPP00738 406 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 DBTP11182 482 aaKnown RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 NCK1P16333 377 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 HMGCLP35914 325 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 MAGEA8P43361 318 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ALDH3B2P48448 385 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 CCT3P49368 545 aaKnown RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 ARHGDIBP52566 201 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 LIM2P55344 173 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 RND3P61587 244 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 RPL23AP62750 156 aaKnown RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 CCNA1P78396 465 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 OTUD4Q01804 1114 aaKnown RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 ST3GAL3Q11203 375 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 RAB40BQ12829 278 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 LTB4RQ15722 352 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 NDUFA9Q16795 377 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TP53I3Q53FA7 332 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 OR4F3Q6IEY1 312 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ZNF343Q6P1L6 599 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TMUB2Q71RG4 321 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TIPARPQ7Z3E1 657 aaKnown RBP3.39□□□□□ -1.87
XRN1-213ENST00000489241 GTSCR1Q86UQ5 136 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 AKR7LQ8NHP1 331 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ADAMTS16Q8TE57 1224 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TPD52L3Q96J77 140 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 ONECUT1Q9UBC0 465 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 PRODH2Q9UF12 536 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 RASD1Q9Y272 281 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 TIMM10BQ9Y5J6 103 aa3.39□□□□□ -1.87
XRN1-213ENST00000489241 PNPLA6Q8IY17 1366 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 FAM240BA0A1B0GVZ2 78 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 A0A1W2PPR1 153 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SHISA9B4DS77 424 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 LRRTM2O43300 516 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SCGNO76038 276 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 VENTXO95231 258 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 ALOX5P09917 674 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 TOP1P11387 765 aaKnown RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 NCF2P19878 526 aaPredicted RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 SEC61GP60059 68 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 OC90Q02509 493 aaPredicted RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 PUDPQ08623 228 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 BST1Q10588 318 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 CUL2Q13617 745 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 PPP1R3AQ16821 1122 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 MICAQ29983 383 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 GLIPR1L2Q4G1C9 344 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 TEX44Q53QW1 395 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms