RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 TSEN54Q7Z6J9 526 aaKnown RBP4.03□□□□□ -1.76
CCL20-204ENST00000489160 Q8N377 158 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 GPR137CQ8N3F9 429 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 COMMD1Q8N668 190 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 CLDN19Q8N6F1 224 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 ZNF485Q8NCK3 441 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 M1APQ8TC57 530 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 PAIP2Q9BPZ3 127 aaKnown RBP4.03□□□□□ -1.76
CCL20-204ENST00000489160 JPT2Q9H910 190 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 NRN1Q9NPD7 142 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 DCAF13Q9NV06 445 aaKnown RBP4.03□□□□□ -1.76
CCL20-204ENST00000489160 HOXC10Q9NYD6 342 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 ADAM28Q9UKQ2 775 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 RARRES3Q9UL19 164 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCL20-204ENST00000489160 TRAF3IP3Q9Y228 551 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 CA5BQ9Y2D0 317 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 DHRS7Q9Y394 339 aa4.03□□□□□ -1.76
CCL20-204ENST00000489160 NPIPA5A0A0B4J1W7 369 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 A0A1B0GU03 582 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 NPIPA5E9PKD4 350 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 BTN3A3O00478 584 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 IMPA2O14732 288 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 FRAT2O75474 233 aaPredicted RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 FLOT1O75955 427 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 TSPAN12O95859 305 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 IGSF6O95976 241 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 POU2F1P14859 743 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 NCK1P16333 377 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 LMO2P25791 158 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 MAT2AP31153 395 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 CASP14P31944 242 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 RDXP35241 583 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 TPMTP51580 245 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SLC7A2P52569 658 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 AP3M2P53677 418 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 C21orf59P57076 290 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 RGS8P57771 180 aaPredicted RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 MECOMQ03112 1051 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SPAG1Q07617 926 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 FCHO2Q0JRZ9 810 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 EIF2B1Q14232 305 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 ATXN7L3Q14CW9 347 aaPredicted RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 SIX1Q15475 284 aaPredicted RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 CHI3L2Q15782 390 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SNAI3Q3KNW1 292 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 CELF3Q5SZQ8 465 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 AADACL4Q5VUY2 407 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SLX4IPQ5VYV7 408 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 LRRC66Q68CR7 880 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 OR4F3Q6IEY1 312 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 GCNT7Q6ZNI0 430 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 LANCL3Q6ZV70 420 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 NUFIP2Q7Z417 695 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 SERINC5Q86VE9 423 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 ZNF781Q8N8C0 355 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 OR4D5Q8NGN0 318 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SCFD1Q8WVM8 642 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 LHX4Q969G2 390 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 CAPNS2Q96L46 248 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 CPXM1Q96SM3 734 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SLC30A2Q9BRI3 323 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 TUBGCP2Q9BSJ2 902 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 NXF5Q9H1B4 397 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 NT5DC2Q9H857 520 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 HEXA-AS1Q9H8Q6 139 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 IL1RL2Q9HB29 575 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 ZFP14Q9HCL3 533 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SMOXQ9NWM0 555 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 KLHL28Q9NXS3 571 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 KLK13Q9UKR3 277 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 MGAT4AQ9UM21 535 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 EIF3LQ9Y262 564 aaKnown RBP4.02□□□□□ -1.77
CCL20-204ENST00000489160 STK38LQ9Y2H1 464 aa4.02□□□□□ -1.77
CCL20-204ENST00000489160 SYNJ2O15056 1496 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 A0A1W2PPR1 153 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 FBLL1A6NHQ2 334 aaKnown RBP4.01□□□□□ -1.77
CCL20-204ENST00000489160 SUPT3HB4E1H0 165 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 C9JVG2 144 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 NPIPA7E9PJI5 369 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 RANBP6O60518 1105 aaKnown RBP4.01□□□□□ -1.77
CCL20-204ENST00000489160 DUSP11O75319 330 aaKnown RBP4.01□□□□□ -1.77
CCL20-204ENST00000489160 TRIM3O75382 744 aaPredicted RBP4.01□□□□□ -1.77
CCL20-204ENST00000489160 SLITRK3O94933 977 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 ALOX5P09917 674 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 NPIPA8P0DM63 369 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 CYP2B6P20813 491 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 HPCAL1P37235 193 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 FDFT1P37268 417 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 ETV5P41161 510 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 OR1G1P47890 313 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 EMDP50402 254 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 OTUD4Q01804 1114 aaKnown RBP4.01□□□□□ -1.77
CCL20-204ENST00000489160 EWSR1Q01844 656 aaKnown RBP eCLIP4.01□□□□□ -1.77
CCL20-204ENST00000489160 BDH1Q02338 343 aa4.01□□□□□ -1.77
CCL20-204ENST00000489160 CD300CQ08708 224 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms