RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CDC26Q8NHZ8 85 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 DAZLQ92904 295 aaKnown RBP7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 TSLPQ969D9 159 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 RFKQ969G6 155 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 RBM18Q96H35 190 aaKnown RBP7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 C5orf34Q96MH7 638 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 DGAT2Q96PD7 388 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 SLC25A23Q9BV35 468 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 EBPLQ9BY08 206 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 LHPPQ9H008 270 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 ZNF160Q9HCG1 818 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 MIEF1Q9NQG6 463 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 GIMAP4Q9NUV9 329 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 GPR83Q9NYM4 423 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 TEKT2Q9UIF3 430 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 HAO1Q9UJM8 370 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 ENTPD4Q9Y227 616 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 EIF3LQ9Y262 564 aaKnown RBP7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 POLR3HQ9Y535 204 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 CLCA3PQ9Y6N3 262 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 ZNF780BQ9Y6R6 833 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 CCDC88CQ9P219 2028 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 SHANK1Q9Y566 2161 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 NUP210LQ5VU65 1888 aa7.43□□□□□ -1.22
TRAPPC12-221ENST00000489032 NAV3Q8IVL0 2385 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 IGKV3D-11A0A0A0MRZ8 115 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 IGHV3-20A0A0C4DH32 117 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 A0A0G2JND7 137 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 A0A1W2PQ72 361 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 CFAP73A6NFT4 308 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SAGE2PA6NJ88 616 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 GLOD5A6NK44 160 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ZAR1LA6NP61 321 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 A8MUA0 341 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 LSM1O15116 133 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 CCDC22O60826 627 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 DIAPH2O60879 1101 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 LDB3O75112 727 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 PEX11AO75192 247 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ERAL1O75616 437 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SERPINA7P05543 415 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ARRB2P32121 409 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ASMTP46597 345 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 HNRNPFP52597 415 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 RPL38P63173 70 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 FOLH1Q04609 750 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 C2orf80Q0P641 193 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 FOXI1Q12951 378 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 CHAF1BQ13112 559 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 BLMHQ13867 455 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 UGT3A2Q3SY77 523 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 AGAP7PQ5VUJ5 663 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 C18orf63Q68DL7 685 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 JMJD6Q6NYC1 403 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 Q6ZSR9 355 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 IKBIPQ70UQ0 350 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 MRGPRGQ86SM5 289 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 FAM9CQ8IZT9 166 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 Q8N1X5 172 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SIRT6Q8N6T7 355 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 C11orf44Q8N8P7 122 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 FNDC5Q8NAU1 212 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 OR14A16Q8NHC5 309 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 MBD3L2Q8NHZ7 208 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 RP9Q8TA86 221 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 M1APQ8TC57 530 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 C16orf78Q8WTQ4 265 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 C10orf82Q8WW14 230 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 TM9SF4Q92544 642 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 TM4SF18Q96CE8 201 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 THOC3Q96J01 351 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ART5Q96L15 291 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 PPP1R36Q96LQ0 422 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 AGAP4Q96P64 663 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SORT1Q99523 831 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 TUBB1Q9H4B7 451 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 KCNK13Q9HB14 408 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SAR1AQ9NR31 198 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 TEX10Q9NXF1 929 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ABI3Q9P2A4 366 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 COPS7AQ9UBW8 275 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 UTS2RQ9UKP6 389 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 DLGAP4Q9Y2H0 992 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 PTGDR2Q9Y5Y4 395 aa7.42□□□□□ -1.22
TRAPPC12-221ENST00000489032 ATP6AP2A0A1C7CYW4 349 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 C17orf105B2RV13 164 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 PGRMC2O15173 223 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 HDAC3O15379 428 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 FGF17O60258 216 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 PRKRAO75569 313 aaKnown RBP7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 ATP6AP2O75787 350 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 IL3P08700 152 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 PRR35P0CG20 571 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 PRPS2P11908 318 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 PORP16435 677 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 CSNK2A2P19784 350 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 HPCAL1P37235 193 aa7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 RPL3P39023 403 aaKnown RBP7.41□□□□□ -1.22
TRAPPC12-221ENST00000489032 XKP51811 444 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms