RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SHEQ5VZ18 495 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 GTF2IRD2BQ6EKJ0 949 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 GTF2IRD2Q86UP8 949 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 RIMKLAQ8IXN7 391 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 ADAMTS15Q8TE58 950 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 CDS1Q92903 461 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 PIGTQ969N2 578 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 OTUB1Q96FW1 271 aaPredicted RBP11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 MARK4Q96L34 752 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 C3orf30Q96M34 536 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 GPATCH2Q9NW75 528 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 ASIC5Q9NY37 505 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 C6orf203Q9P0P8 240 aaPredicted RBP11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 GIMAP2Q9UG22 337 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 ACTL7BQ9Y614 415 aa11.71□□□□□ -0.53
ATPAF2-207ENST00000488753 ACANP16112 2415 aa11.71□□□□□ -0.54
ATPAF2-207ENST00000488753 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 GJE1A6NN92 205 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 SIAH2O43255 324 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 CXCL13O43927 109 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 SKAP2O75563 359 aaPredicted RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 SNUPNO95149 360 aaKnown RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 C6orf47O95873 294 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 PABPC4LP0CB38 370 aaKnown RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 FPR1P21462 350 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 ATP12AP54707 1039 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 EMX2Q04743 252 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 TP53BP2Q13625 1128 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 DCST2Q5T1A1 773 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 KIRREL3Q8IZU9 778 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 POC1BQ8TC44 478 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 PHOSPHO1Q8TCT1 267 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 TUBGCP3Q96CW5 907 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 SH3YL1Q96HL8 342 aaPredicted RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 NPAS1Q99742 590 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 NOP53Q9NZM5 478 aaKnown RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 RAB21Q9UL25 225 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 ICAM5Q9UMF0 924 aa11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 GPC6Q9Y625 555 aaPredicted RBP11.7□□□□□ -0.54
ATPAF2-207ENST00000488753 A0A0J9YW62 118 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 DUXAA6NLW8 204 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 NPIPB9F8W1W9 429 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 TNFSF11O14788 317 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 ARHGEF9O43307 516 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 AK1P00568 194 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 G6PDP11413 515 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 NID1P14543 1247 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 P2RX1P51575 399 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 CLDN8P56748 225 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 CARD18P57730 90 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 NKX6-1P78426 367 aaPredicted RBP11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 ZNF117Q03924 483 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 FOXF1Q12946 379 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 RNPS1Q15287 305 aaKnown RBP11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 ACKR1Q16570 336 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 C20orf204Q6ZNR8 217 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 BEND4Q6ZU67 534 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 STK32CQ86UX6 486 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 NUDCD3Q8IVD9 361 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 KRTCAP2Q8N6L1 136 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 WFDC11Q8NEX6 87 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 OSTF1Q92882 214 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 CPNE4Q96A23 557 aaPredicted RBP11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 PIK3IP1Q96FE7 263 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 DUSP26Q9BV47 211 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 KLHL4Q9C0H6 718 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 GP6Q9HCN6 339 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 SSU72Q9NP77 194 aaKnown RBP11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 TIGARQ9NQ88 270 aa11.69□□□□□ -0.54
ATPAF2-207ENST00000488753 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 BIRC5O15392 142 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 CFLARO15519 480 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 EIF4E2O60573 245 aaKnown RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 SERPINE1P05121 402 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 CREB1P16220 341 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 PSMB1P20618 241 aaKnown RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 AGTR1P30556 359 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 NR1H2P55055 460 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 HBA1P69905 142 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 ZNF239Q16600 458 aaKnown RBP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 EXOC3L2Q2M3D2 409 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 BEX5Q5H9J7 111 aa11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.68□□□□□ -0.54
ATPAF2-207ENST00000488753 CBLN3Q6UW01 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms