RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SH3BGRL2Q9UJC5 107 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 ANAPC7Q9UJX3 599 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 SNX6Q9UNH7 406 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 MRPS7Q9Y2R9 242 aaKnown RBP2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 L3MBTL1Q9Y468 752 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 ALG6Q9Y672 507 aa2.78□□□□□ -1.96
HMGB1P36-201ENST00000487709 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 A8MU10 97 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 KLLNB2CW77 178 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 E7ESA3 106 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 ANGPT2O15123 496 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 HDAC3O15379 428 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 LANCL1O43813 399 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TSC22D2O75157 780 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 RHOBTB1O94844 696 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 LRATO95237 230 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 GUCA1CO95843 209 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 H2BFMP0C1H6 154 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TSPY4P0CV99 314 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TSPY10P0CW01 314 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 KRT13P13646 458 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 ANXA13P27216 316 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 HOXD10P28358 340 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 IL2RGP31785 369 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 YWHABP31946 246 aaKnown RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 HPDP32754 393 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR3A4PP47883 348 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 PLK1P53350 603 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 AP3M2P53677 418 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 LINC01620Q4KN68 170 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 EOGTQ5NDL2 527 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 LIPNQ5VXI9 398 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 SULT1C3Q6IMI6 304 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 UFSP1Q6NVU6 142 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 ARCQ7LC44 396 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 C16orf62Q7Z3J2 963 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 ACOT1Q86TX2 421 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 NRMQ8IXM6 262 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF100Q8IYN0 542 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 CLDN19Q8N6F1 224 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 C14orf178Q8N769 122 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 STXBP6Q8NFX7 210 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR2T33Q8NG76 320 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR10A7Q8NGE5 316 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR9A4Q8NGU2 314 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 RAET1EQ8TD07 263 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 SETD7Q8WTS6 366 aaKnown RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TCTEX1D2Q8WW35 142 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 SPRYD4Q8WW59 207 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 SLC5A11Q8WWX8 675 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMEM121Q9BTD3 319 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 NUDT15Q9NV35 164 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 C6orf203Q9P0P8 240 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 SPRR3Q9UBC9 169 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 DCDC2Q9UHG0 476 aa2.77□□□□□ -1.97
HMGB1P36-201ENST00000487709 A0A1B0GWJ7 208 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 PPIAL4DF5H284 164 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 K7EPI3 171 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 SDHDO14521 159 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CTAGE5O15320 804 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 TBX19O60806 448 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 LYPLA1O75608 230 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 ADCY5O95622 1261 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 OPN1LWP04000 364 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 XRCC1P18887 633 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 ATP6V1C1P21283 382 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 TBXA2RP21731 343 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 VDAC1P21796 283 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CHI3L1P36222 383 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 TIMM10P62072 90 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 RPS8P62241 208 aaKnown RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CHRNB3Q05901 458 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 RAB40BQ12829 278 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 PRR4Q16378 134 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CFAP221Q4G0U5 840 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 PRR30Q53SZ7 412 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR2B11Q5JQS5 317 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 RABGAP1LQ5R372 815 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 PPP1R27Q86WC6 154 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CCDC50Q8IVM0 306 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 UBQLNLQ8IYU4 475 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 NEIL2Q969S2 332 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 MS4A14Q96JA4 679 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 NXF5Q9H1B4 397 aaKnown RBP2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 Q9H3A6 140 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 IKZF5Q9H5V7 419 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 ASB8Q9H765 288 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 CAB39LQ9H9S4 337 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMOD2Q9NZR1 351 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR1A1Q9P1Q5 309 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 GNG12Q9UBI6 72 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 MAB21L2Q9Y586 359 aa2.76□□□□□ -1.97
HMGB1P36-201ENST00000487709 ANKRD30BQ9BXX2 1392 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 A0A1W2PQ72 361 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 HELTA6NFD8 242 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 EPOPA6NHQ4 379 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 E7ENQ6 273 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 NPIPA7E9PJI5 369 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms