RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 DUSP22Q9NRW4 184 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 GLRX2Q9NS18 164 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 ZCCHC3Q9NUD5 404 aaKnown RBP10.9□□□□□ -0.66
VPS16-208ENST00000487461 MKS1Q9NXB0 559 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 GIN1Q9NXP7 522 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 SNX8Q9Y5X2 465 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 KCNE3Q9Y6H6 103 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 ABCA2Q9BZC7 2435 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 DSCAMO60469 2012 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 UQCRHLA0A096LP55 91 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 NPIPA5A0A0B4J1W7 369 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 TMEM114B3SHH9 223 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 NPIPA7E9PJI5 369 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 H7C1Q1 480 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ZNF195O14628 629 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 SCAMP2O15127 329 aaKnown RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 SPAG7O75391 227 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 SLU7O95391 586 aaKnown RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 NTN1O95631 604 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 HSPA4LO95757 839 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PLAUP00749 431 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 NPIPA8P0DM63 369 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PPP3CBP16298 524 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ME2P23368 584 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ARRB2P32121 409 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 SFTPDP35247 375 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 HPCAL1P37235 193 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 CCT3P49368 545 aaKnown RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 ZNF117Q03924 483 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PTGR1Q14914 329 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 KLHL26Q53HC5 615 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 XKR7Q5GH72 579 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 BEX5Q5H9J7 111 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 C6orf136Q5SQH8 315 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PDSS1Q5T2R2 415 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 CDC73Q6P1J9 531 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 CBLN3Q6UW01 205 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ZCCHC23Q6ZST2 131 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 WFDC8Q8IUA0 241 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 KRTCAP2Q8N6L1 136 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 FBXO27Q8NI29 283 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PSMA8Q8TAA3 256 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 PHOSPHO1Q8TCT1 267 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 IGFBPL1Q8WX77 278 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 OR5P2Q8WZ92 322 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ZNF524Q96C55 264 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 COQ8BQ96D53 544 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 CHMP6Q96FZ7 201 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 APOPT1Q96IL0 206 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 COX4I2Q96KJ9 171 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 KLHL15Q96M94 604 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ACTRT3Q9BYD9 372 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 SRXN1Q9BYN0 137 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 C12orf49Q9H741 205 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 CXorf36Q9H7Y0 433 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 EML4Q9HC35 981 aaKnown RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 GPATCH2Q9NW75 528 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 ZDHHC2Q9UIJ5 367 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 NUP214P35658 2090 aaPredicted RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 FN1P02751 2386 aaKnown RBP10.89□□□□□ -0.67
VPS16-208ENST00000487461 HEATR5AQ86XA9 2040 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 DNHD1Q96M86 4753 aa10.89□□□□□ -0.67
VPS16-208ENST00000487461 USF3Q68DE3 2245 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 TRIM64A6NGJ6 449 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 TRIM64BA6NI03 449 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 C6orf47O95873 294 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 HEXAP06865 529 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 DDX5P17844 614 aaKnown RBP10.88□□□□□ -0.67
VPS16-208ENST00000487461 ATP6V1C1P21283 382 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 MAPK1P28482 360 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 AGTR1P30556 359 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 EIF1P41567 113 aaKnown RBP10.88□□□□□ -0.67
VPS16-208ENST00000487461 FOXF1Q12946 379 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 TOMM34Q15785 309 aaPredicted RBP10.88□□□□□ -0.67
VPS16-208ENST00000487461 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS16-208ENST00000487461 IL23RQ5VWK5 629 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 GTF2IRD2BQ6EKJ0 949 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 BEND4Q6ZU67 534 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 PLEKHM3Q6ZWE6 761 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 NUFIP2Q7Z417 695 aaKnown RBP10.88□□□□□ -0.67
VPS16-208ENST00000487461 MTERF4Q7Z6M4 381 aaKnown RBP10.88□□□□□ -0.67
VPS16-208ENST00000487461 GTF2IRD2Q86UP8 949 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 TCP10LQ8TDR4 215 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 GPR119Q8TDV5 335 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 ADAMTS15Q8TE58 950 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 ABHD3Q8WU67 409 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 PLPPR2Q96GM1 343 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 BDH2Q9BUT1 245 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 C1orf50Q9BV19 199 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 ACTR6Q9GZN1 396 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 HOXD1Q9GZZ0 328 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 ICAM5Q9UMF0 924 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 GPR52Q9Y2T5 361 aa10.88□□□□□ -0.67
VPS16-208ENST00000487461 FAM171A2A8MVW0 826 aa10.87□□□□□ -0.67
VPS16-208ENST00000487461 NPIPB9F8W1W9 429 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms