RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 KCNK9Q9NPC2 374 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 TESMINQ9Y4I5 508 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 KCNE3Q9Y6H6 103 aa17.14■□□□□ 0.33
CLIP2-206ENST00000487091 DUXAA6NLW8 204 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 HRGP04196 525 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 BGNP21810 368 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 ME2P23368 584 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 SUMO3P55854 103 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-206ENST00000487091 SIRPAP78324 504 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 STX3Q13277 289 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 OR4F3Q6IEY1 312 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PAMR1Q6UXH9 720 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 FAM214BQ7L5A3 538 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 OR5AK3PQ8NH89 298 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 POC1BQ8TC44 478 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 MBD6Q96DN6 1003 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PPP1R36Q96LQ0 422 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 KLHDC3Q9BQ90 382 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PRRG4Q9BZD6 226 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 DPY30Q9C005 99 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 OPN3Q9H1Y3 402 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PLEKHF2Q9H8W4 249 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 MCTS1Q9ULC4 181 aaKnown RBP17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PCDHGB4Q9UN71 923 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 PLEKHA6Q9Y2H5 1048 aa17.13■□□□□ 0.33
CLIP2-206ENST00000487091 AK1P00568 194 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 IL11P20809 199 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 MATN1P21941 496 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 ELK4P28324 431 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 ADH6P28332 368 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 SOAT1P35610 550 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 SLC6A8P48029 635 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 P2RX1P51575 399 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 ZNF117Q03924 483 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLIP2-206ENST00000487091 PDSS1Q5T2R2 415 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 C6orf120Q7Z4R8 191 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 CLECL1Q8IZS7 167 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 ZNF610Q8N9Z0 462 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 CHDHQ8NE62 594 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-206ENST00000487091 OR2V1Q8NHB1 315 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 GMPPAQ96IJ6 420 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-206ENST00000487091 SDF2Q99470 211 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 PLSCR4Q9NRQ2 329 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 GLRX2Q9NS18 164 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 ICAM5Q9UMF0 924 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 PROCRQ9UNN8 238 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 EMC9Q9Y3B6 208 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
CLIP2-206ENST00000487091 NPIPA5A0A0B4J1W7 369 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 A0A0J9YW62 118 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 PRSS51A0A1B0GVH4 220 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 NPIPA7E9PJI5 369 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 GTPBP1O00178 669 aaKnown RBP17.11■□□□□ 0.33
CLIP2-206ENST00000487091 CXCL13O43927 109 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 SCN2BO60939 215 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 SYNGR4O95473 234 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 RAF1P04049 648 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 NPIPA8P0DM63 369 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 POU2F1P14859 743 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 LBPP18428 481 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 ANXA8L1Q5VT79 327 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 CBLN3Q6UW01 205 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 LILRA2Q8N149 483 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 VPS37AQ8NEZ2 397 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 OR5D16Q8NGK9 328 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 OR6K3Q8NGY3 331 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 MIPOL1Q8TD10 442 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 TESCQ96BS2 214 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 WFIKKN1Q96NZ8 548 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 ALPK1Q96QP1 1244 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 NUF2Q9BZD4 464 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
CLIP2-206ENST00000487091 GPC6Q9Y625 555 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-206ENST00000487091 HEATR5AQ86XA9 2040 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 RNF103-CHMP3A0A140T963 221 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 ESPNB1AK53 854 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 C16orf97H3BN30 126 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 TNFSF11O14788 317 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 ANKRD28O15084 1053 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 OIP5O43482 229 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 EIF4E2O60573 245 aaKnown RBP17.1■□□□□ 0.33
CLIP2-206ENST00000487091 SS18L1O75177 396 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-206ENST00000487091 PLGP00747 810 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-206ENST00000487091 OPN1LWP04000 364 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 UGT2B10P36537 528 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 KCNJ5P48544 419 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 CLNS1AP54105 237 aaKnown RBP17.1■□□□□ 0.33
CLIP2-206ENST00000487091 BST1Q10588 318 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 FOXF1Q12946 379 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 DPY19L1Q2PZI1 675 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 HHATQ5VTY9 493 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 HBMQ6B0K9 141 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 GTF2IRD2BQ6EKJ0 949 aa17.1■□□□□ 0.33
CLIP2-206ENST00000487091 OGFOD2Q6N063 350 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms