RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GPATCH2Q9NW75 528 aa21.98■■□□□ 1.11
LIME1-206ENST00000487026 MCTS1Q9ULC4 181 aaKnown RBP21.98■■□□□ 1.11
LIME1-206ENST00000487026 NUP214P35658 2090 aaPredicted RBP21.98■■□□□ 1.11
LIME1-206ENST00000487026 C7orf72A4D263 438 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 EFNA2O43921 213 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 LYPLA1O75608 230 aaPredicted RBP21.97■■□□□ 1.11
LIME1-206ENST00000487026 HSPA4LO95757 839 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 LINGO3P0C6S8 592 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 ATP6V1C1P21283 382 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 SHC1P29353 583 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 SERPINB5P36952 375 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 CBLN3Q6UW01 205 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 LILRA2Q8N149 483 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 OR56A1Q8NGH5 318 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 OR6K3Q8NGY3 331 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 OR5AK3PQ8NH89 298 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 PSMA8Q8TAA3 256 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 OSTF1Q92882 214 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 TUBGCP3Q96CW5 907 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 MARK4Q96L34 752 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 UBTD1Q9HAC8 227 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 ATAD3AQ9NVI7 634 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 FAF1Q9UNN5 650 aaPredicted RBP21.97■■□□□ 1.11
LIME1-206ENST00000487026 CARD8Q9Y2G2 431 aa21.97■■□□□ 1.11
LIME1-206ENST00000487026 CFLARO15519 480 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 SS18L1O75177 396 aaPredicted RBP21.96■■□□□ 1.11
LIME1-206ENST00000487026 G6PDP11413 515 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 FOSL1P15407 271 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 ME2P23368 584 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 SFTPDP35247 375 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 FOXF1Q12946 379 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 NDUFAF6Q330K2 333 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 LSM12Q3MHD2 195 aaKnown RBP21.96■■□□□ 1.11
LIME1-206ENST00000487026 KLHL26Q53HC5 615 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 DCST2Q5T1A1 773 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.96■■□□□ 1.11
LIME1-206ENST00000487026 ESPNLQ6ZVH7 1005 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 RIMKLAQ8IXN7 391 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 ROBO4Q8WZ75 1007 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 PKNOX2Q96KN3 472 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 PPP1R36Q96LQ0 422 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 PRPF18Q99633 342 aaKnown RBP21.96■■□□□ 1.11
LIME1-206ENST00000487026 SMR3AQ99954 134 aa21.96■■□□□ 1.11
LIME1-206ENST00000487026 ZNF395Q9H8N7 513 aaPredicted RBP21.96■■□□□ 1.11
LIME1-206ENST00000487026 PAQR5Q9NXK6 330 aaPredicted RBP21.96■■□□□ 1.11
LIME1-206ENST00000487026 WDR91A4D1P6 747 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 ITM2AO43736 263 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 TYROBPO43914 113 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 NUDT14O95848 222 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 THBDP07204 575 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 PRPS1L1P21108 318 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 LOXP28300 417 aaPredicted RBP21.95■■□□□ 1.1
LIME1-206ENST00000487026 ETV4P43268 484 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 CARD18P57730 90 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 TOMM34Q15785 309 aaPredicted RBP21.95■■□□□ 1.1
LIME1-206ENST00000487026 PGS1Q32NB8 556 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 NUDCD3Q8IVD9 361 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 FBXO27Q8NI29 283 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 KLHL15Q96M94 604 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 DUSP26Q9BV47 211 aa21.95■■□□□ 1.1
LIME1-206ENST00000487026 HOXB4P17483 251 aaPredicted RBP21.94■■□□□ 1.1
LIME1-206ENST00000487026 ACKR1Q16570 336 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 PDSS1Q5T2R2 415 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 STAC2Q6ZMT1 411 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 MTERF4Q7Z6M4 381 aaKnown RBP21.94■■□□□ 1.1
LIME1-206ENST00000487026 CLEC4FQ8N1N0 589 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 ZNF614Q8N883 585 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 ZNF527Q8NB42 609 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 ATP6V1C2Q8NEY4 427 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 OR5D16Q8NGK9 328 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 PPP1R14CQ8TAE6 165 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 ZNF524Q96C55 264 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 BHLHE41Q9C0J9 482 aaPredicted RBP21.94■■□□□ 1.1
LIME1-206ENST00000487026 HOXD1Q9GZZ0 328 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 C12orf49Q9H741 205 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.94■■□□□ 1.1
LIME1-206ENST00000487026 ICAM5Q9UMF0 924 aa21.94■■□□□ 1.1
LIME1-206ENST00000487026 V9GYY5 206 aaPredicted RBP21.94■■□□□ 1.1
LIME1-206ENST00000487026 GTPBP1O00178 669 aaKnown RBP21.93■■□□□ 1.1
LIME1-206ENST00000487026 ZNF195O14628 629 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 SOAT1P35610 550 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 EIF1P41567 113 aaKnown RBP21.93■■□□□ 1.1
LIME1-206ENST00000487026 P2RX1P51575 399 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 ATP12AP54707 1039 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 RPS26P62854 115 aaKnown RBP21.93■■□□□ 1.1
LIME1-206ENST00000487026 HBA1P69905 142 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 EMBQ6PCB8 327 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 Q71RC1 249 aaPredicted RBP21.93■■□□□ 1.1
LIME1-206ENST00000487026 NATD1Q8N6N6 113 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 RFWD2Q8NHY2 731 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 SFXN5Q8TD22 340 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 OR7D2Q96RA2 312 aa21.93■■□□□ 1.1
LIME1-206ENST00000487026 H3BNH8 94 aa21.92■■□□□ 1.1
LIME1-206ENST00000487026 SMPD2O60906 423 aa21.92■■□□□ 1.1
LIME1-206ENST00000487026 KRT16P08779 473 aa21.92■■□□□ 1.1
LIME1-206ENST00000487026 EMX2Q04743 252 aa21.92■■□□□ 1.1
LIME1-206ENST00000487026 PDCD2Q16342 344 aaPredicted RBP21.92■■□□□ 1.1
LIME1-206ENST00000487026 TMEM176BQ3YBM2 270 aaPredicted RBP21.92■■□□□ 1.1
LIME1-206ENST00000487026 OLIG3Q7RTU3 272 aa21.92■■□□□ 1.1
LIME1-206ENST00000487026 P3H2Q8IVL5 708 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms