RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TRIM36Q9NQ86 728 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 MED11Q9P086 117 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 CTSFQ9UBX1 484 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 PCDHGA5Q9Y5G8 931 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 NPFFR2Q9Y5X5 522 aa9.93□□□□□ -0.82
CCDC171-208ENST00000486641 FXYD6-FXYD2A0A087WZ82 144 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 DAPL1A0PJW8 107 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 CREBL2O60519 120 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SOCS5O75159 536 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF821O75541 412 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SC5DO75845 299 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 RLN2P04090 185 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SERPIND1P05546 499 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 C1GALT1C1LP0DN25 315 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SAGP10523 405 aaPredicted RBP9.92□□□□□ -0.82
CCDC171-208ENST00000486641 EPXP11678 715 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 RAB13P51153 203 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 TAS2R41P59536 307 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 MAT1AQ00266 395 aaKnown RBP9.92□□□□□ -0.82
CCDC171-208ENST00000486641 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 TMEM44Q2T9K0 475 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF626Q68DY1 528 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 FAAP20Q6NZ36 180 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 RPTNQ6XPR3 784 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 HTR3DQ70Z44 454 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 LINGO2Q7L985 606 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 LRRTM4Q86VH4 590 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 OR52B4Q8NGK2 314 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 THEM6Q8WUY1 208 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SMPDL3AQ92484 453 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 OSTF1Q92882 214 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 PNPLA2Q96AD5 504 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 FXYD6Q9H0Q3 95 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 SEMA4GQ9NTN9 838 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 TAS2R5Q9NYW4 299 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 ABRACLQ9P1F3 81 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 P2RX2Q9UBL9 471 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 PLCL2Q9UPR0 1127 aa9.92□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF840PA6NDX5 716 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 FRS3O43559 492 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 BNIP3LO60238 219 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF254O75437 659 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 GLAP06280 429 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 IFNGR2P38484 337 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 H2BFSP57053 126 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 TBPL1P62380 186 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 HFEQ30201 348 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 PGGHGQ32M88 737 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 LINC00303Q3SY05 128 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 FAM209BQ5JX69 171 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 PLBD1Q6P4A8 553 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 CXXC5Q7LFL8 322 aaKnown RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SZRD1Q7Z422 152 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 CMTM4Q8IZR5 234 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OR52I2Q8NH67 350 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF480Q8WV37 535 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 KLK6Q92876 244 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 VOPP1Q96AW1 172 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 QRSL1Q9H0R6 528 aaKnown RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 FN3KQ9H479 309 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 TRPC4Q9UBN4 977 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 KLK11Q9UBX7 282 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 PQLC2LA1A4F0 135 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 MYADML2A6NDP7 307 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 CPSF4LA6NMK7 179 aaKnown RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 REM1O75628 298 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 CDC123O75794 336 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 CATP04040 527 aaKnown RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 RB1P06400 928 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 ASGR2P07307 311 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 PAICSP22234 425 aaKnown RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SERPINA4P29622 427 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 THPOP40225 353 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 GPR4P46093 362 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SPINT3P49223 89 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 PNLIPRP1P54315 467 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SERTAD2Q14140 314 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 MAPK14Q16539 360 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 FAM26DQ5JW98 314 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 ELFN2Q5R3F8 820 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 TMEM88Q6PEY1 159 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 ZNF613Q6PF04 617 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OR10H4Q8NGA5 316 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OR5M1Q8NGP8 315 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OR10K1Q8NGX5 313 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 SCAMP4Q969E2 229 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 GPR62Q9BZJ7 368 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 MED17Q9NVC6 651 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 NFKBIL1Q9UBC1 381 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-208ENST00000486641 OPN4Q9UHM6 478 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 FBXL3Q9UKT7 428 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 MYO10Q9HD67 2058 aa9.91□□□□□ -0.82
CCDC171-208ENST00000486641 J3QLW9 94 aa9.9□□□□□ -0.82
CCDC171-208ENST00000486641 RTCAO00442 366 aaKnown RBP9.9□□□□□ -0.82
CCDC171-208ENST00000486641 ITGA10O75578 1167 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms