RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SHHQ15465 462 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TPGS2Q68CL5 300 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ZNF841Q6ZN19 808 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ARCQ7LC44 396 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
RTN4-214ENST00000486085 PDCL2Q8N4E4 241 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 MGARPQ8TDB4 240 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 SENP8Q96LD8 212 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 TGS1Q96RS0 853 aaKnown RBP4.82□□□□□ -1.64
RTN4-214ENST00000486085 FUNDC2Q9BWH2 189 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ZBP1Q9H171 429 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ABCG4Q9H172 646 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 SLC26A1Q9H2B4 701 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 LHX5Q9H2C1 402 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 LIME1Q9H400 295 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 DPEP3Q9H4B8 488 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 SP140LQ9H930 580 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 GNB4Q9HAV0 340 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CSNK1G1Q9HCP0 422 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CISHQ9NSE2 258 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 ZNHIT6Q9NWK9 470 aaKnown RBP4.82□□□□□ -1.64
RTN4-214ENST00000486085 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
RTN4-214ENST00000486085 DNAJC12Q9UKB3 198 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 CDH9Q9ULB4 789 aa4.82□□□□□ -1.64
RTN4-214ENST00000486085 FAM92AA1XBS5 289 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 YJEFN3A6XGL0 299 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 BTNL10A8MVZ5 291 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 SHISA9B4DS77 424 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 PES1O00541 588 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 CYB561D2O14569 222 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 OLFM2O95897 454 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 ACADSP16219 412 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 HOXA9P31269 272 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 CASP14P31944 242 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 SLC1A6P48664 564 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 GEMP55040 296 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 HADHBP55084 474 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 POLR2FP61218 127 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 COX10Q12887 443 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 CBX3Q13185 183 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 FASTKQ14296 549 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 P2RY14Q15391 338 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 WDR59Q6PJI9 974 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 TMEM184AQ6ZMB5 413 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 PHC2Q8IXK0 858 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 PEX5LQ8IYB4 626 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 ARL6IP6Q8N6S5 226 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 C17orf47Q8NEP4 570 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 OR6M1Q8NGM8 313 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 SPPL2BQ8TCT7 592 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 FAM222BQ8WU58 562 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 HSFY1Q96LI6 401 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 SPATA13Q96N96 652 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 CRACR2AQ9BSW2 395 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 IL37Q9NZH6 218 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 AKAP7Q9P0M2 348 aaPredicted RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 LCMT1Q9UIC8 334 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 MGAT4AQ9UM21 535 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 TDRKHQ9Y2W6 561 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 SPTBN5Q9NRC6 3674 aaKnown RBP4.81□□□□□ -1.64
RTN4-214ENST00000486085 PATJQ8NI35 1801 aa4.81□□□□□ -1.64
RTN4-214ENST00000486085 GBF1Q92538 1859 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 RPL37AP8A6NKH3 93 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 TLR4O00206 839 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 MED7O43513 233 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 SFTPBP07988 381 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 CCDC159P0C7I6 412 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 CYP11B1P15538 503 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 LMO2P25791 158 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 NSFP46459 744 aaKnown RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 OR1G1P47890 313 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 NDST1P52848 882 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ACY1Q03154 408 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 HSPA14Q0VDF9 509 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 MSLNQ13421 630 aaPredicted RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 POM121L1PQ3SYA9 428 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 HSP90AA4PQ58FG1 418 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 SPOPLQ6IQ16 392 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 Q6ZRG5 221 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 TMEM110Q86TL2 294 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 SLC47A2Q86VL8 602 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 VPS36Q86VN1 386 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 PHF13Q86YI8 300 aaPredicted RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 LRRC8AQ8IWT6 810 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 PARP8Q8N3A8 854 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 GVQW1Q8N7I0 195 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 MRPL43Q8N983 215 aaKnown RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 RELL2Q8NC24 303 aaPredicted RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 ZNRF1Q8ND25 227 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ICA1LQ8NDH6 482 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ZNF461Q8TAF7 563 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ZNF606Q8WXB4 792 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 MRPL45Q9BRJ2 306 aaKnown RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 ELOVL4Q9GZR5 314 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ADNPQ9H2P0 1102 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms