RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GALNT9Q9HCQ5 603 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SPAG4Q9NPE6 437 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SLC6A13Q9NSD5 602 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 DEPPQ9NTK1 212 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SLAMF8Q9P0V8 285 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 ACAD8Q9UKU7 415 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 KCNE3Q9Y6H6 103 aa7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SPENQ96T58 3664 aaKnown RBP7.54□□□□□ -1.2
SF3A1-208ENST00000485618 SPTAN1Q13813 2472 aaKnown RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 A0A1B0GVC2 190 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 C2orf72A6NCS6 295 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 NPIPB9F8W1W9 429 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 AQP7O14520 342 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SEMA7AO75326 666 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 CYP7B1O75881 506 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ATP5HO75947 161 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 STAMBPO95630 424 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 IGHG3P01860 377 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 RNF224P0DH78 156 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ARAFP10398 606 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 NID1P14543 1247 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 HK1P19367 917 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 CALB2P22676 271 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 CHMP24386 653 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 PTGER4P35408 488 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 RFC3P40938 356 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 MAGEA5P43359 124 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 P2RX1P51575 399 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 MVDP53602 400 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 GAS1P54826 345 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 PER3P56645 1201 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 MTPNP58546 118 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 PMP22Q01453 160 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 BCL2A1Q16548 175 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 GTDC1Q4AE62 458 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 PRR30Q53SZ7 412 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ZNF311Q5JNZ3 666 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SAMD4BQ5PRF9 694 aaKnown RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 PDSS1Q5T2R2 415 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 WLSQ5T9L3 541 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 BICRALQ6AI39 1079 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 OR5M10Q6IEU7 315 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 FRRS1Q6ZNA5 592 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 TRILQ7L0X0 811 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 TRPM8Q7Z2W7 1104 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 GALNT10Q86SR1 603 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ARMC8Q8IUR7 673 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SIAH3Q8IW03 269 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ARHGAP24Q8N264 748 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 FADS6Q8N9I5 356 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 WDSUB1Q8N9V3 476 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 OR2T12Q8NG77 320 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 OR5W2Q8NH69 310 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 OR10A6Q8NH74 314 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 NEIL3Q8TAT5 605 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 C1GALT1C1Q96EU7 318 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 TMEM19Q96HH6 336 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 OR2B2Q9GZK3 357 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 EXOSC3Q9NQT5 275 aaKnown RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SERINC1Q9NRX5 453 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ADA2Q9NZK5 511 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SELENONQ9NZV5 590 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 MED11Q9P086 117 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 GPC6Q9Y625 555 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 SPIN1Q9Y657 262 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-208ENST00000485618 LRRK2Q5S007 2527 aa7.53□□□□□ -1.2
SF3A1-208ENST00000485618 ABCA12Q86UK0 2595 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 A0A0G2JMM0 328 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 A0A1W2PPB8 328 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 A0A1W2PRS3 328 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ELOVL7A1L3X0 281 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PINLYPA6NC86 204 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 LRRC3CA6NJW4 275 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ENO4A6NNW6 628 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 KIR3DP1A8MWS1 328 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 AHRRA9YTQ3 701 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 B2RBV5 119 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 UGT2B17O75795 530 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 CBX6O95503 412 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 CHRM4P08173 479 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 LINGO3P0C6S8 592 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 UBTFL6P0CB48 400 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 GABRA1P14867 456 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ZNF17P17021 662 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 HOXB9P17482 250 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-208ENST00000485618 MST1P26927 711 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 ADH6P28332 368 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PRKAR1BP31321 381 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 IFNA8P32881 189 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PCGF2P35227 344 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PTGDSP41222 190 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 HTR3AP46098 478 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 CCR4P51679 360 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 MAP2K6P52564 334 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 PSME3P61289 254 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 FGFBP1Q14512 234 aa7.52□□□□□ -1.21
SF3A1-208ENST00000485618 VMACQ2NL98 169 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms