RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 KLHL15Q96M94 604 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 TMEM204Q9BSN7 226 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ACTRT3Q9BYD9 372 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF395Q9H8N7 513 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ZCCHC3Q9NUD5 404 aaKnown RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ZFHX3Q15911 3703 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 TNFSF11O14788 317 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 TUBBP07437 444 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ME2P23368 584 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 CD226Q15762 336 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 LSM12Q3MHD2 195 aaKnown RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 SZRD1Q7Z422 152 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF527Q8NB42 609 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 FBXO30Q8TB52 745 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 CDS1Q92903 461 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 SMR3AQ99954 134 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 HDHD5Q9BXW7 423 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ATAD3AQ9NVI7 634 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 LGALS13Q9UHV8 139 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 GJE1A6NN92 205 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 NUDT17P0C025 328 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 LAMP1P11279 417 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 AGTR1P30556 359 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CCT3P49368 545 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 P2RX1P51575 399 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CARD18P57730 90 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 C21orf58P58505 322 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF117Q03924 483 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 RNPS1Q15287 305 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 SLC25A53Q5H9E4 307 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CCNJQ5T5M9 372 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ANKRD34AQ69YU3 496 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 PLEKHM3Q6ZWE6 761 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 YTHDF3Q7Z739 585 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 STK32CQ86UX6 486 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 RNF128Q8TEB7 428 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CPNE4Q96A23 557 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZC3HAV1LQ96H79 300 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 SH3YL1Q96HL8 342 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 KLHDC3Q9BQ90 382 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 TACO1Q9BSH4 297 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 L2HGDHQ9H9P8 463 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 TIGARQ9NQ88 270 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 GPATCH2Q9NW75 528 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CLEC4AQ9UMR7 237 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 UQCRHLA0A096LP55 91 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 TMEM233B4DJY2 109 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 NPIPB9F8W1W9 429 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 H3BNH8 94 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF195O14628 629 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ATP6V1C1P21283 382 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ATP12AP54707 1039 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 LASP1Q14847 261 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF239Q16600 458 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ATP6AP1LQ52LC2 224 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 C6orf136Q5SQH8 315 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 RIMKLAQ8IXN7 391 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 LILRA2Q8N149 483 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 STEAP2Q8NFT2 490 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 PHOSPHO1Q8TCT1 267 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ADAMTS15Q8TE58 950 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 Q96MF0 132 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZIM3Q96PE6 472 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 PRPF18Q99633 342 aaKnown RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ROPN1BQ9BZX4 212 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 BHLHE41Q9C0J9 482 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 CXorf36Q9H7Y0 433 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ROPN1Q9HAT0 212 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF701Q9NV72 531 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ICAM5Q9UMF0 924 aa10.23□□□□□ -0.77
SCFD1-206ENST00000484733 ETV2O00321 342 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-206ENST00000484733 EFNA2O43921 213 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 PEX11AO75192 247 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 NTN1O95631 604 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 LY6G6DO95868 133 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 OPN1LWP04000 364 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 PRPS1L1P21108 318 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 PTH2RP49190 550 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 FOXF1Q12946 379 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 SMU1Q2TAY7 513 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 DCST2Q5T1A1 773 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 PPP4R4Q6NUP7 873 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 ADAM5Q6NVV9 412 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF704Q6ZNC4 412 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF611Q8N823 705 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 TOR1AIP2Q8NFQ8 470 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 GPR119Q8TDV5 335 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 JADE3Q92613 823 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
SCFD1-206ENST00000484733 ASIC5Q9NY37 505 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 SLC17A7Q9P2U7 560 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 FAF1Q9UNN5 650 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-206ENST00000484733 ACANP16112 2415 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 TLDC2A0PJX2 215 aa10.22□□□□□ -0.77
SCFD1-206ENST00000484733 EIF4E2O60573 245 aaKnown RBP10.22□□□□□ -0.77
SCFD1-206ENST00000484733 EFNA1P20827 205 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms