RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 CENPLQ8N0S6 344 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 BPIFB2Q8N4F0 458 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 CD177Q8N6Q3 437 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 CCDC26Q8TAB7 109 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 THUMPD2Q9BTF0 503 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 ZNF416Q9BWM5 594 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 TM2D1Q9BX74 207 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 GSDMCQ9BYG8 508 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 UTP6Q9NYH9 597 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 B9D1Q9UPM9 204 aa3.31□□□□□ -1.88
FNDC3B-210ENST00000483344 COL22A1Q8NFW1 1626 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 SLIT2O94813 1529 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 EHBP1L1Q8N3D4 1523 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ZSCAN5BA6NJL1 495 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 MAPK13O15264 365 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 DUX1O43812 170 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 NOL4O94818 638 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CHRNA1P02708 482 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 HEXBP07686 556 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 XRCC1P18887 633 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 FASP25445 335 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 PTBP1P26599 531 aaKnown RBP eCLIP3.3□□□□□ -1.882e-6■■□□□ 12.6
FNDC3B-210ENST00000483344 RPL4P36578 427 aaKnown RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 MDH2P40926 338 aaKnown RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ASAH1Q13510 395 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 TEX44Q53QW1 395 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 UTF1Q5T230 341 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 RIPPLY2Q5TAB7 128 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 SLC22A10Q63ZE4 541 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CYS1Q717R9 158 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ZNF573Q86YE8 665 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CSNK1A1LQ8N752 337 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ZSCAN4Q8NAM6 433 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ZPLD1Q8TCW7 415 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 MRAPQ8TCY5 172 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 ADAMTS16Q8TE57 1224 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 SDSLQ96GA7 329 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 AKR1E2Q96JD6 320 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CASD1Q96PB1 797 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 SLC30A2Q9BRI3 323 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 TMEM121Q9BTD3 319 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 POLR3FQ9H1D9 316 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CYTH4Q9UIA0 394 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 CRLS1Q9UJA2 301 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 SPHKAPQ2M3C7 1700 aa3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 XRN1Q8IZH2 1706 aaKnown RBP3.3□□□□□ -1.88
FNDC3B-210ENST00000483344 C1orf167Q5SNV9 1468 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 HCFC1P51610 2035 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 DISP2A7MBM2 1401 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 ERBINQ96RT1 1412 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 RIMS2Q9UQ26 1411 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 CFAP65Q6ZU64 1925 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 FAM74A7A6NL05 159 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NOL3O60936 208 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 CSF2P04141 144 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 HTR2AP28223 471 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 IL2RGP31785 369 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NF2P35240 595 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 DLSTP36957 453 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 GNPDA1P46926 289 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NOVA1P51513 510 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 C1QTNF8P60827 252 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NTHL1P78549 312 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NUCB2P80303 420 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 BDH1Q02338 343 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 GLYR1Q49A26 553 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 FAM74A3Q4VXF1 159 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 PAN3Q58A45 887 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 ASPHD2Q6ICH7 369 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 OR8G2PQ6IF36 304 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 LANCL3Q6ZV70 420 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 ZBED8Q8IZ13 594 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 SERAC1Q96JX3 654 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 DPH7Q9BTV6 452 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 PAXXQ9BUH6 204 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 GLT8D2Q9H1C3 349 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 DHX33Q9H6R0 707 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 SLC35D1Q9NTN3 355 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 MRPL39Q9NYK5 338 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 VSIG4Q9Y279 399 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 AP1M2Q9Y6Q5 423 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 GOLGB1Q14789 3259 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 TMEM131LA2VDJ0 1609 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 NRXN3Q9Y4C0 1643 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 DUOX2Q9NRD8 1548 aa3.29□□□□□ -1.88
FNDC3B-210ENST00000483344 ADGRL3Q9HAR2 1447 aa3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 BRWD3Q6RI45 1802 aa3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 IGLV3-10A0A075B6K4 115 aa3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 FRG2CA6NGY1 282 aa3.28□□□□□ -1.88
FNDC3B-210ENST00000483344 CLDN5O00501 218 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms