RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 MAP3K8P41279 467 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 NUDT6P53370 316 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 DSCR9P59020 149 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 IRX1P78414 480 aaPredicted RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 CKAP4Q07065 602 aaKnown RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 PPA1Q15181 289 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 STK11Q15831 433 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 NRF1Q16656 503 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 WHAMMP3Q1A5X7 153 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 VPS26BQ4G0F5 336 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 CLEC2AQ6UVW9 174 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 SEZ6L2Q6UXD5 910 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 FCRLAQ7L513 359 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 ZAR1Q86SH2 424 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 ATP6V1C2Q8NEY4 427 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 OR2W6PQ8NHA6 318 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 CEP70Q8NHQ1 597 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 B4GALNT2Q8NHY0 566 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 FAM110BQ8TC76 370 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 ZNF775Q96BV0 537 aaPredicted RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 MUCL1Q96DR8 90 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 ADAD1Q96M93 576 aaKnown RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 PAFAH2Q99487 392 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 POTEKPQ9BYX7 375 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 MYNNQ9NPC7 610 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 UBQLN4Q9NRR5 601 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 TMEM216Q9P0N5 145 aa11.36□□□□□ -0.59
TMEM54-206ENST00000482771 WBP11Q9Y2W2 641 aaKnown RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 POLR3HQ9Y535 204 aaPredicted RBP11.36□□□□□ -0.59
TMEM54-206ENST00000482771 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 LYZL6O75951 148 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 KCNK2O95069 426 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 LINGO3P0C6S8 592 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 GPC1P35052 558 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 EIF1P41567 113 aaKnown RBP11.35□□□□□ -0.59
TMEM54-206ENST00000482771 PRIM2P49643 509 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 PRKAA2P54646 552 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 CDH11P55287 796 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 PKNOX1P55347 436 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 SRSF2Q01130 221 aaKnown RBP11.35□□□□□ -0.59
TMEM54-206ENST00000482771 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
TMEM54-206ENST00000482771 HSPB3Q12988 150 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 RAB35Q15286 201 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 CYB5R2Q6BCY4 276 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.35□□□□□ -0.59
TMEM54-206ENST00000482771 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 SLC16A11Q8NCK7 471 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 NUP43Q8NFH3 380 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 OR6Y1Q8NGX8 325 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 FBXO27Q8NI29 283 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 KIF18AQ8NI77 898 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 FBXO30Q8TB52 745 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 DCAKDQ8WVC6 231 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 HTRA1Q92743 480 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 EGLN2Q96KS0 407 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 CACNG6Q9BXT2 260 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 FUT8Q9BYC5 575 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 SHARPINQ9H0F6 387 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 GP6Q9HCN6 339 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 PRSS50Q9UI38 385 aa11.35□□□□□ -0.59
TMEM54-206ENST00000482771 IGHV3-15A0A0B4J1V0 119 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 E7EQL1 145 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 SCDO00767 359 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 ABCD4O14678 606 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 URI1O94763 535 aaPredicted RBP11.34□□□□□ -0.59
TMEM54-206ENST00000482771 SNRPAP09012 282 aaKnown RBP11.34□□□□□ -0.59
TMEM54-206ENST00000482771 ACP2P11117 423 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 ATP5F1P24539 256 aaPredicted RBP11.34□□□□□ -0.59
TMEM54-206ENST00000482771 TTKP33981 857 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 FOXA1P55317 472 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 VLDLRP98155 873 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 LCP2Q13094 533 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 CD226Q15762 336 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 IMPG1Q17R60 797 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 ANKRD26P1Q6NSI1 321 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 NOXRED1Q6NXP6 359 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 LRIG3Q6UXM1 1119 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 Q6ZSR9 355 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 Q6ZT83 130 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 TDRPQ86YL5 185 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 MISPQ8IVT2 679 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 SLC43A2Q8N370 569 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 FAM76AQ8TAV0 307 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 HOXB13Q92826 284 aaPredicted RBP11.34□□□□□ -0.59
TMEM54-206ENST00000482771 CIDECQ96AQ7 238 aaPredicted RBP11.34□□□□□ -0.59
TMEM54-206ENST00000482771 C16orf58Q96GQ5 468 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 AMBRA1Q9C0C7 1298 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 TMEM160Q9NX00 188 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 LPAR3Q9UBY5 353 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 ZNF180Q9UJW8 692 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 STK38LQ9Y2H1 464 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
TMEM54-206ENST00000482771 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.33□□□□□ -0.6
TMEM54-206ENST00000482771 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms