RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 CDC14CA4D256 554 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 ANKRD34BA5PLL1 514 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 MAGEB4O15481 346 aaPredicted RBP8.53□□□□□ -1.04
CALD1-220ENST00000482470 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
CALD1-220ENST00000482470 IL7P13232 177 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 HK1P19367 917 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 SLC1A3P43003 542 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 MAZP56270 477 aaKnown RBP8.53□□□□□ -1.04
CALD1-220ENST00000482470 TNFRSF17Q02223 184 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 TFF2Q03403 129 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 DUSP2Q05923 314 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 SRSF5Q13243 272 aaKnown RBP8.53□□□□□ -1.04
CALD1-220ENST00000482470 TTLL10Q6ZVT0 673 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
CALD1-220ENST00000482470 NEDD4LQ96PU5 975 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 HHIPQ96QV1 700 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 CHST8Q9H2A9 424 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 SLC38A1Q9H2H9 487 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 KIR3DX1Q9H7L2 352 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 HHATLQ9HCP6 504 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 FBXO8Q9NRD0 319 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 ING3Q9NXR8 418 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 SPAG17Q6Q759 2223 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 UNC13CQ8NB66 2214 aa8.53□□□□□ -1.04
CALD1-220ENST00000482470 FAM47E-STBD1D6RA91 191 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 FGF17O60258 216 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 GPR75O95800 540 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 SPNP16150 400 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 UGT2B10P36537 528 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 TPMTP51580 245 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 GBX2P52951 348 aaPredicted RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 PCBP4P57723 403 aaKnown RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 RUNX2Q13950 521 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 INSL4Q14641 139 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 SHISA6Q6ZSJ9 500 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 LINGO2Q7L985 606 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 ZNF619Q8N2I2 560 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 LRRC17Q8N6Y2 441 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 CDCA4Q9BXL8 241 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 PAQR5Q9NXK6 330 aaPredicted RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 SIDT1Q9NXL6 827 aaKnown RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.04
CALD1-220ENST00000482470 CD207Q9UJ71 328 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 ERVK-19Q9WJR5 959 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 IER3IP1Q9Y5U9 82 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 CDH10Q9Y6N8 788 aa8.52□□□□□ -1.04
CALD1-220ENST00000482470 CXorf51AA0A1B0GTR3 108 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 A0A1W2PPV9 198 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TMEM150CB9EJG8 249 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 NPIPB8E9PQR5 432 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 DSCR3O14972 297 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 KHDRBS3O75525 346 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 TFPIP10646 304 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 RNH1P13489 461 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 TEAD1P28347 426 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 SLC6A6P31641 620 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TRHRP34981 398 aaPredicted RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 PSMB10P40306 273 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 ATP12AP54707 1039 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 AGERQ15109 404 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 COMMD2Q86X83 199 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 MFSD4AQ8N468 514 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 NANOGP1Q8N7R0 232 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 SLC37A2Q8TED4 501 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 RSC1A1Q92681 617 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TNFRSF13CQ96RJ3 184 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 DAPP1Q9UN19 280 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 POLR1DQ9Y2S0 133 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 YBX2Q9Y2T7 364 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 ASB4Q9Y574 426 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 ORC5O43913 435 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 DHFRP00374 187 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 HBQ1P09105 142 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 MAP2K3P46734 347 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 SNRPGP62308 76 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 SSX1Q16384 188 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 C1orf189Q5VU69 101 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TMEM64Q6YI46 380 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TSEN54Q7Z6J9 526 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 SFXN5Q8TD22 340 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 THEM6Q8WUY1 208 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 CNOT9Q92600 299 aaKnown RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 MRGPRX1Q96LB2 322 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 UBQLN3Q9H347 655 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 WSB2Q9NYS7 404 aaPredicted RBP8.52□□□□□ -1.05
CALD1-220ENST00000482470 MUTYHQ9UIF7 546 aa8.52□□□□□ -1.05
CALD1-220ENST00000482470 TRIM64A6NGJ6 449 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 MCIDASD6RGH6 385 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 ZNF670-ZNF695F2Z2N8 137 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 XKRYO14609 159 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 SSX4O60224 188 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 CTSVO60911 334 aa8.51□□□□□ -1.05
CALD1-220ENST00000482470 KCNJ13O60928 360 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms