RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 HNF4GQ14541 408 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 KCTD19Q17RG1 926 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 TMEM249Q2WGJ8 235 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ZCWPW2Q504Y3 356 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ESCO2Q56NI9 601 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 YIF1BQ5BJH7 314 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 WASHC2DQ5SRD0 308 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 LYPLAL1Q5VWZ2 237 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ZNF626Q68DY1 528 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ANKRD54Q6NXT1 300 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 FAM122CQ6P4D5 195 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 G2E3Q7L622 706 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 NIPA1Q7RTP0 329 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SERPINA11Q86U17 422 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MMAAQ8IVH4 418 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 ZFP82Q8N141 532 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ARHGAP18Q8N392 663 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SYT14Q8NB59 555 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR2AP1Q8NGE2 309 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR4D5Q8NGN0 318 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR1J2Q8NGS2 313 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR2L2Q8NH16 312 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 OR4L1Q8NH43 312 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SORCS1Q8WY21 1168 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 NAT6Q93015 286 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 PYCR2Q96C36 320 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 FBXL8Q96CD0 374 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 DNAJC1Q96KC8 554 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 CEP170P1Q96L14 293 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 GUCD1Q96NT3 240 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SLC22A12Q96S37 553 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 KLHDC3Q9BQ90 382 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SLC30A2Q9BRI3 323 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MIS12Q9H081 205 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 RACGAP1Q9H0H5 632 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 FAM124BQ9H5Z6 455 aaPredicted RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 AAMDCQ9H7C9 122 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 SLC52A3Q9NQ40 469 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 DIABLOQ9NR28 239 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 ABCB10Q9NRK6 738 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 INPP5EQ9NRR6 644 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 TAS2R9Q9NYW1 312 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 TXNDC16Q9P2K2 825 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 EIF3KQ9UBQ5 218 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 LHX3Q9UBR4 397 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 BCAP29Q9UHQ4 241 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 MAN1B1Q9UKM7 699 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 EIF3LQ9Y262 564 aaKnown RBP3.71□□□□□ -1.82
VPS41-212ENST00000482217 KLHDC2Q9Y2U9 406 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 YIPF1Q9Y548 306 aa3.71□□□□□ -1.82
VPS41-212ENST00000482217 CNTNAP2Q9UHC6 1331 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ZFYVE9O95405 1425 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 EVPLQ92817 2033 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 A0A096LPK6 155 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 GOLGA6L10A6NI86 522 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CCT8L1PA6NM43 557 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 F8VVB4 439 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 F8VWA3 439 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 M0R296 226 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CLDN5O00501 218 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ADAM10O14672 748 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 KMOO15229 486 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ATP8B1O43520 1251 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 NDUFA2O43678 99 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SLC28A2O43868 658 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 B3GAT3O94766 335 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 NXPH2O95156 264 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ASS1P00966 412 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 FGGP02679 453 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 KRT16P08779 473 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SMIM10L1P0DMW3 83 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 PGAM1P18669 254 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 NPR2P20594 1047 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 S100A1P23297 94 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 FCARP24071 287 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 DCKP27707 260 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CRABP2P29373 138 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 RBMS1P29558 406 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 TNFSF8P32971 234 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 DUTP33316 252 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 PTGER1P34995 402 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 TGFBR2P37173 567 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CD79BP40259 229 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 COMPP49747 757 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 SERPINB8P50452 374 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 DUSP3P51452 185 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 PLA2G16P53816 162 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ERVK11-1P61568 191 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 MRPS25P82663 173 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 PITPNAQ00169 270 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 MBTD1Q05BQ5 628 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 RAD51Q06609 339 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SLC3A1Q07837 685 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 C2orf54Q08AI8 447 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 C1orf61Q13536 156 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SLC17A1Q14916 467 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms