RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ATG16L1Q676U5 607 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 OGFOD2Q6N063 350 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 C16orf62Q7Z3J2 963 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 GGNQ86UU5 652 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 SLC43A2Q8N370 569 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 ZNF781Q8N8C0 355 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 OR10D3Q8NH80 312 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 OR2V1Q8NHB1 315 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 FNDC9Q8TBE3 224 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 MIPOL1Q8TD10 442 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 TMEM234Q8WY98 164 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 PMM1Q92871 262 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 CDS1Q92903 461 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 STARD4Q96DR4 205 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 KLHL15Q96M94 604 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 GPATCH2Q9NW75 528 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 RNF103-CHMP3A0A140T963 221 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 E9PBE3 544 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 ZNF264O43296 627 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 TMCC2O75069 709 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 C6orf47O95873 294 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 UBL4AP11441 157 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 UQCRBP14927 111 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 LBPP18428 481 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 FPR1P21462 350 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 UQCRC2P22695 453 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 TCEA1P23193 301 aaKnown RBP10.29□□□□□ -0.76
CCM2-213ENST00000480658 UGT2B10P36537 528 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 KHKP50053 298 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 AGFG1P52594 562 aaKnown RBP10.29□□□□□ -0.76
CCM2-213ENST00000480658 IST1P53990 364 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 NR1H2P55055 460 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 CLDN20P56880 219 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 HBA1P69905 142 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 GNA13Q14344 377 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 PGS1Q32NB8 556 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 KLHL26Q53HC5 615 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 HBMQ6B0K9 141 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 PPP4R4Q6NUP7 873 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 C3orf33Q6P1S2 294 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 LILRA2Q8N149 483 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 GLB1L3Q8NCI6 653 aaPredicted RBP10.29□□□□□ -0.76
CCM2-213ENST00000480658 FBXO30Q8TB52 745 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 SLC25A43Q8WUT9 341 aaPredicted RBP10.29□□□□□ -0.76
CCM2-213ENST00000480658 ST8SIA1Q92185 356 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 PIGTQ969N2 578 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 ARSGQ96EG1 525 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 SLC35G5Q96KT7 338 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 C3orf30Q96M34 536 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 RNF145Q96MT1 663 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 ZBTB18Q99592 522 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 CXorf36Q9H7Y0 433 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 MEAF6Q9HAF1 191 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 KCNK9Q9NPC2 374 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 SERINC1Q9NRX5 453 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 BEX4Q9NWD9 120 aaPredicted RBP10.29□□□□□ -0.76
CCM2-213ENST00000480658 NKIRAS1Q9NYS0 192 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 FLRT3Q9NZU0 649 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 SLC35A3Q9Y2D2 325 aa10.29□□□□□ -0.76
CCM2-213ENST00000480658 INTS1Q8N201 2190 aaKnown RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 ANKRD28O15084 1053 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 HRGP04196 525 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 LINGO3P0C6S8 592 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 FOSL1P15407 271 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 PGCP20142 388 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 MATN1P21941 496 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 SLC7A1P30825 629 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 KIR2DL2P43627 348 aaPredicted RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 MAP2K6P52564 334 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 SUCLG1P53597 346 aaKnown RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 CARD18P57730 90 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 ZNF117Q03924 483 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 GUSBP1Q15486 140 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 ARHGAP11BQ3KRB8 267 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 TNFAIP8L3Q5GJ75 292 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 TMEM201Q5SNT2 666 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 APOOLQ6UXV4 268 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 EIF3MQ7L2H7 374 aaKnown RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 SPATA19Q7Z5L4 167 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 KRTCAP2Q8N6L1 136 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 TMCO5AQ8N6Q1 288 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 OR4A15Q8NGL6 344 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 OR5W2Q8NH69 310 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 LINC01560Q8TB33 94 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 FIG4Q92562 907 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 C16orf58Q96GQ5 468 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 SH3YL1Q96HL8 342 aaPredicted RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 ADGRG7Q96K78 797 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 OR7D2Q96RA2 312 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 HDHD5Q9BXW7 423 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 RTN4RQ9BZR6 473 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 ZNF350Q9GZX5 532 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 ZNF395Q9H8N7 513 aaPredicted RBP10.28□□□□□ -0.76
CCM2-213ENST00000480658 AKTIPQ9H8T0 292 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 NGBQ9NPG2 151 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 THAP1Q9NVV9 213 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 ICAM5Q9UMF0 924 aa10.28□□□□□ -0.76
CCM2-213ENST00000480658 LIPT1Q9Y234 373 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms