RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 PRDX6P30041 224 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 SLC37A1P57057 533 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 MRPS22P82650 360 aaKnown RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.162e-20■□□□□ 9.1
HDLBP-238ENST00000479894 FOXF2Q12947 444 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 CYLC2Q14093 348 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 WIPI1Q5MNZ9 446 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 C6orf10Q5SRN2 563 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 LYPD8Q6UX82 237 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 ZNF321PQ8N8H1 164 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 CDRT4Q8N9R6 151 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 OR52R1Q8NGF1 315 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 TMEM171Q8WVE6 324 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 KAT2AQ92830 837 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 ZNF597Q96LX8 424 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 JSRP1Q96MG2 331 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 TM9SF2Q99805 663 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 DOHHQ9BU89 302 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 NMUR2Q9GZQ4 415 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 UBQLN3Q9H347 655 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 ZCCHC3Q9NUD5 404 aaKnown RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 GID8Q9NWU2 228 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 THUMPD1Q9NXG2 353 aaKnown RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 CORO2BQ9UQ03 480 aa14.08□□□□□ -0.16
HDLBP-238ENST00000479894 CHCHD2Q9Y6H1 151 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-238ENST00000479894 A0A096LPI6 279 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 UPK1AO00322 258 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 SCN2BO60939 215 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 TRIM3O75382 744 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 ABCB1P08183 1280 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 S1PR1P21453 382 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 DRD5P21918 477 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 SOAT1P35610 550 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 CHI3L1P36222 383 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 PPICP45877 212 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 TMED10P49755 219 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 CDK9P50750 372 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 PSMD4P55036 377 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 HBA1P69905 142 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 MRPS35P82673 323 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 GAB1Q13480 694 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 LTB4RQ15722 352 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 ETFDHQ16134 617 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 PRSS53Q2L4Q9 553 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 KRTAP24-1Q3LI83 254 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 TRMT12Q53H54 448 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 FAM180BQ6P0A1 224 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 FAM111BQ6SJ93 734 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 DGAT2L6Q6ZPD8 337 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 SZRD1Q7Z422 152 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 FUNDC1Q8IVP5 155 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 NUP43Q8NFH3 380 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 OR7G2Q8NG99 324 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 OR9I1Q8NGQ6 314 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 WFIKKN1Q96NZ8 548 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 UCN2Q96RP3 112 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 UGT2B28Q9BY64 529 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 GIN1Q9NXP7 522 aa14.07□□□□□ -0.16
HDLBP-238ENST00000479894 CNOT11Q9UKZ1 510 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 YLPM1P49750 1951 aaKnown RBP14.07□□□□□ -0.16
HDLBP-238ENST00000479894 CBX7O95931 251 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 CT62P0C5K7 136 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 NAGAP17050 411 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 SSTR4P31391 388 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 KRT20P35900 424 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 ATP5J2P56134 94 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 RPP38P78345 283 aaKnown RBP14.06□□□□□ -0.16
HDLBP-238ENST00000479894 DPP10Q8N608 796 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 VPS33AQ96AX1 596 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 FAM120BQ96EK7 910 aaKnown RBP14.06□□□□□ -0.16
HDLBP-238ENST00000479894 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-238ENST00000479894 GAL3ST4Q96RP7 486 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 AMBRA1Q9C0C7 1298 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 WWTR1Q9GZV5 400 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 EFCAB1Q9HAE3 211 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 HHATLQ9HCP6 504 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 Q9N2J8 555 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 PACSIN3Q9UKS6 424 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 AP3M1Q9Y2T2 418 aa14.06□□□□□ -0.16
HDLBP-238ENST00000479894 RNF103-CHMP3A0A140T963 221 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 A0A1W2PS29 197 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 MSTNO14793 375 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 TRAPPC6AO75865 159 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 ALOX5P09917 674 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 FBXO45P0C2W1 286 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 CYP4B1P13584 511 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 EMDP50402 254 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 PRKAG1P54619 331 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 PHC1P78364 1004 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 DUSP2Q05923 314 aa14.05□□□□□ -0.16
HDLBP-238ENST00000479894 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-238ENST00000479894 EBPQ15125 230 aaKnown RBP14.05□□□□□ -0.16
HDLBP-238ENST00000479894 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms