RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 TOR1AIP2Q8NFQ8 470 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 RND1Q92730 232 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 ELAC2Q9BQ52 826 aaKnown RBP18.56■□□□□ 0.56
VARS-224ENST00000479051 SLC38A1Q9H2H9 487 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 SLAMF8Q9P0V8 285 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 VDAC3Q9Y277 283 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 GMEB1Q9Y692 573 aa18.56■□□□□ 0.56
VARS-224ENST00000479051 USP9XQ93008 2570 aaPredicted RBP18.56■□□□□ 0.56
VARS-224ENST00000479051 PRAMEF27A3QJZ7 478 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 BBIP1A8MTZ0 92 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 C5orf58C9J3I9 102 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 H0Y3Z8 333 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 CYP7B1O75881 506 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 BCHEP06276 602 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 CPN1P15169 458 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 POU3F2P20265 443 aaPredicted RBP18.55■□□□□ 0.56
VARS-224ENST00000479051 AGAP20933 346 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 RNF144AP50876 292 aaPredicted RBP18.55■□□□□ 0.56
VARS-224ENST00000479051 CCR4P51679 360 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 SEC24CP53992 1094 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 CBFBQ13951 182 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 FGFBP1Q14512 234 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 BCL2A1Q16548 175 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 DCST1Q5T197 706 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 GCNT6Q5T4J0 391 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 MSRB3Q8IXL7 192 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 PEX5LQ8IYB4 626 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 WDYHV1Q96HA8 205 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 LAT2Q9GZY6 243 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 A4GALTQ9NPC4 353 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 MED17Q9NVC6 651 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 KCNE5Q9UJ90 142 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 L3MBTL1Q9Y468 752 aa18.55■□□□□ 0.56
VARS-224ENST00000479051 TRBV5-3A0A0A0MS03 114 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 OR2M5A3KFT3 312 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 C7orf72A4D263 438 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 DBIP07108 87 aaKnown RBP18.54■□□□□ 0.56
VARS-224ENST00000479051 TFPTP0C1Z6 253 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 RNF224P0DH78 156 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 BMP2P12643 396 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 CD1EP15812 388 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 EIF1P41567 113 aaKnown RBP18.54■□□□□ 0.56
VARS-224ENST00000479051 LHX2P50458 406 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 GYS2P54840 703 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 EEFSECP57772 596 aaKnown RBP18.54■□□□□ 0.56
VARS-224ENST00000479051 B3GALT5-AS1P59052 145 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 ADORA2A-AS1P86434 159 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 PMPCAQ10713 525 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 MAPK14Q16539 360 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 PLPPR5Q32ZL2 321 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 COQ5Q5HYK3 327 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 CBLN3Q6UW01 205 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 DLEU7Q6UYE1 221 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 CHMP1BQ7LBR1 199 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 CMIPQ8IY22 773 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 MEIOBQ8N635 442 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 OR5W2Q8NH69 310 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 SLC38A5Q8WUX1 472 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 WDR60Q8WVS4 1066 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 ITLN2Q8WWU7 325 aaPredicted RBP18.54■□□□□ 0.56
VARS-224ENST00000479051 CGREF1Q99674 301 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 TTYH2Q9BSA4 534 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 ICAM5Q9UMF0 924 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 FAM215AQ9Y5M1 114 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 AP4B1Q9Y6B7 739 aa18.54■□□□□ 0.56
VARS-224ENST00000479051 A0A0G2JPF8 293 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 CENPVL1A0A0U1RR11 272 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 AGAP5A6NIR3 686 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 HNRNPCL2B2RXH8 293 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 HNRNPCL3B7ZW38 293 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 H3BML4 177 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 HNRNPCL1O60812 293 aaKnown RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 UBTFL6P0CB48 400 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 HNRNPCL4P0DMR1 293 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 IL7RP16871 459 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 STARP49675 285 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 NUP107P57740 925 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 KCNJ10P78508 379 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 SRYQ05066 204 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 CYLC2Q14093 348 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 ACSF3Q4G176 576 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 RUNDC3AQ59EK9 446 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 PRAMEF8Q5VWM4 474 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 PRAMEF7Q5VXH5 474 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 RETREG3Q86VR2 466 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 LACC1Q8IV20 430 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 GTPBP8Q8N3Z3 284 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 METTL25Q8N6Q8 603 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 PCYOX1LQ8NBM8 494 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 OR5M1Q8NGP8 315 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 OR10Q1Q8NGQ4 319 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 ZPLD1Q8TCW7 415 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 ASB5Q8WWX0 329 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 TMEM19Q96HH6 336 aa18.53■□□□□ 0.56
VARS-224ENST00000479051 CPPED1Q9BRF8 314 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 GPC6Q9Y625 555 aaPredicted RBP18.53■□□□□ 0.56
VARS-224ENST00000479051 OIP5O43482 229 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 EPPINO95925 133 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 GLI4P10075 376 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ZNF708P17019 499 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms