RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NWD1Q149M9 1564 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 PSMB2P49721 201 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SLC36A2Q495M3 483 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 VARS2Q5ST30 1063 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 RAET1LQ5VY80 246 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 FAM151BQ6UXP7 276 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TMEM64Q6YI46 380 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ACBD7Q8N6N7 88 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 LRRC52Q8N7C0 313 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ZNF454Q8N9F8 522 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TMEM178AQ8NBL3 297 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 UBA3Q8TBC4 463 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 LKAAEAR1Q8TD35 194 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SLC41A2Q96JW4 573 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 FER1L6-AS2Q96M78 137 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TMEM47Q9BQJ4 181 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SPACA1Q9HBV2 294 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 MEIOCA2RUB1 952 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TPP1O14773 563 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 GMPRP36959 345 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 FXYD6P3P58550 94 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 RAB33AQ14088 237 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 HLXQ14774 488 aaPredicted RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 Q3ZCU0 254 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 FFAR4Q5NUL3 377 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 DEFB128Q7Z7B8 93 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 CELF5Q8N6W0 485 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 OR4C5Q8NGB2 326 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 OR5R1Q8NH85 324 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 RXFP2Q8WXD0 754 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ZNF566Q969W8 418 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 RNF208Q9H0X6 261 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 FKRPQ9H9S5 495 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ZNF160Q9HCG1 818 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 CISHQ9NSE2 258 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 AP5S1Q9NUS5 200 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 KNTC1P50748 2209 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SLC38A8A6NNN8 435 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SLC22A5O76082 557 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 CXCL14O95715 111 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 GIFP27352 417 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 GPR12P47775 334 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ERVPABLB-1P60509 514 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PTP4A2Q12974 167 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TMEM119Q4V9L6 283 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SCGB1D4Q6XE38 83 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SIRT2Q8IXJ6 389 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SLC30A7Q8NEW0 376 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SMAP2Q8WU79 429 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 ACO2Q99798 780 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 GPR61Q9BZJ8 451 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 C11orf16Q9NQ32 467 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NLKQ9UBE8 527 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 A6NDN8 102 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 FAM166BA8MTA8 275 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TULP2O00295 520 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 IL7P13232 177 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 S100A4P26447 101 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 IL2RGP31785 369 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 KIR2DS2P43631 304 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF143P52747 638 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 PDZK1IP1Q13113 114 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SF3A2Q15428 464 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 TANGO2Q6ICL3 276 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TMEM65Q6PI78 240 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TMEM207Q6UWW9 146 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 XKR5Q6UX68 686 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF573Q86YE8 665 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF417Q8TAU3 575 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ADAMTS16Q8TE57 1224 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ASB11Q8WXH4 323 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 RAB8BQ92930 207 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NDRG4Q9ULP0 352 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 PPM1HQ9ULR3 514 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 FCF1Q9Y324 198 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 A0A0J9YYE9 177 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 OR51F1A6NGY5 319 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 SOX1O00570 391 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 GABRPO00591 440 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 GABRDO14764 452 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 FAM155BO75949 473 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TIMP2P16035 220 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 AADACP22760 399 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TRHRP34981 398 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 RPS21P63220 83 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 BTG2P78543 158 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 HES1Q14469 280 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 POU4F3Q15319 338 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ADIRFQ15847 76 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 PRSS55Q6UWB4 352 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF662Q6ZS27 426 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 GRASPQ7Z6J2 395 aaPredicted RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 GALMQ96C23 342 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ZNF382Q96SR6 550 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 WACQ9BTA9 647 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 ATP13A2Q9NQ11 1180 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 TRNAU1APQ9NX07 287 aaKnown RBP5.14□□□□□ -1.59
USF3-202ENST00000478658 DNAJC5BQ9UF47 199 aa5.14□□□□□ -1.59
USF3-202ENST00000478658 NXT1Q9UKK6 140 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms