RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CITED1Q99966 193 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 C19orf43Q9BQ61 176 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BPIFA3Q9BQP9 254 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RIOK1Q9BRS2 568 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZBP1Q9H171 429 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RNF41Q9H4P4 317 aaPredicted RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF446Q9NWS9 450 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 FAM120CQ9NX05 1096 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 P2RX2Q9UBL9 471 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RNF14Q9UBS8 474 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 TUBGCP4Q9UGJ1 667 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RNF24Q9Y225 148 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 SLCO1B1Q9Y6L6 691 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 KIF27Q86VH2 1401 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 MAP3K19Q56UN5 1328 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TRAV9-2A0A087WT02 112 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TRAV26-1A0A087WT03 109 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 LOC100653049A0A140TA62 436 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 RNF222A6NCQ9 220 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TCP11X1B4DZS4 312 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 NPIPA2E9PIF3 369 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PPIAL4DF5H284 164 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 GOLGA8SH3BPF8 625 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 SH2D1BO14796 132 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 SRPX2O60687 465 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF253O75346 499 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 KRT34O76011 436 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 CSTAP01040 98 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 CHRNA1P02708 482 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 HIST1H2AGP0C0S8 130 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 PNMTP11086 282 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TUBG1P23258 451 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 AXLP30530 894 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ATP5C1P36542 298 aaKnown RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 NOVP48745 357 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 HMGCS2P54868 508 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 CLDN8P56748 225 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 NAAAQ02083 359 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 MAB21L1Q13394 359 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ELAVL3Q14576 367 aaKnown RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 SSX2Q16385 188 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TATDN3Q17R31 274 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 Q1RN00 199 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 EXOC3L2Q2M3D2 409 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF528Q3MIS6 628 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC22A6Q4U2R8 563 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF311Q5JNZ3 666 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TCHHL1Q5QJ38 904 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PIP5KL1Q5T9C9 394 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PRAMEF5Q5TYX0 476 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PRAMEF6Q5VXH4 476 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TTC19Q6DKK2 380 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 APOOLQ6UXV4 268 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 KDM7AQ6ZMT4 941 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF600Q6ZNG1 722 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 MOB2Q70IA6 237 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 BZW1Q7L1Q6 419 aaKnown RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 ECHDC2Q86YB7 292 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 HIST2H2ABQ8IUE6 130 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 CBWD2Q8IUF1 395 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 VSTM4Q8IW00 320 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC22A18ASQ8N1D0 253 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 OR5D13Q8NGL4 314 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TRMT10AQ8TBZ6 339 aaKnown RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 GIPC3Q8TF64 312 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3□□□□□ -1.93
SMARCA1-204ENST00000478420 ANP32BQ92688 251 aaKnown RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 HIST1H2ACQ93077 130 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TMEM45BQ96B21 275 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ZBED6CLQ96FA7 236 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 VPS35Q96QK1 796 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PANX1Q96RD7 426 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 MCCC1Q96RQ3 725 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 CCNL2Q96S94 520 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 TTYH2Q9BSA4 534 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 NACA2Q9H009 215 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 NEK6Q9HC98 313 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 TUBG2Q9NRH3 451 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 AGPAT3Q9NRZ7 376 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 PRR34Q9NV39 138 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 RCOR3Q9P2K3 495 aaPredicted RBP3□□□□□ -1.93
SMARCA1-204ENST00000478420 MLXQ9UH92 298 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC9A8Q9Y2E8 581 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 IFT52Q9Y366 437 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 OR10H1Q9Y4A9 318 aa3□□□□□ -1.93
SMARCA1-204ENST00000478420 CENPJQ9HC77 1338 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 A0A0A6YYD4 124 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 HEATR9A2RTY3 570 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 METTL21EPA6NDL7 271 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF879B4DU55 563 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SUPT3HB4E1H0 165 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ABCD4O14678 606 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 OR1F1O43749 312 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 DFNA5O60443 496 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CDH16O75309 829 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms