RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 L3MBTL1Q9Y468 752 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 KDM4EB2RXH2 506 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 LCE2BO14633 110 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MRASO14807 208 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 CCDC22O60826 627 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 NUDT14O95848 222 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 F12P00748 615 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 CSTAP01040 98 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 TFPTP0C1Z6 253 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 UBTFL6P0CB48 400 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF41P51814 821 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 CRISP3P54108 245 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 GFRA1P56159 465 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 SRYQ05066 204 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 GANABQ14697 944 aaKnown RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MAPRE2Q15555 327 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MMEL1Q495T6 779 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 RUNDC3AQ59EK9 446 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 NHSL2Q5HYW2 709 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 GCNT6Q5T4J0 391 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 LRRC74BQ6ZQY2 392 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MTERF4Q7Z6M4 381 aaKnown RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 ULK2Q8IYT8 1036 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 UBQLNLQ8IYU4 475 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MARVELD2Q8N4S9 558 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 DPP10Q8N608 796 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 TSPEARQ8WU66 669 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 SLC38A5Q8WUX1 472 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 SMPDL3BQ92485 455 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 DTNBP1Q96EV8 351 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 ANKRD27Q96NW4 1050 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 RAD21L1Q9H4I0 556 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MRGBPQ9NV56 204 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 MED17Q9NVC6 651 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 SUCOQ9UBS9 1254 aaKnown RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 TENM4Q6N022 2769 aa9.3□□□□□ -0.92
HDAC6-222ENST00000478095 RP1L1Q8IWN7 2480 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-222ENST00000478095 SVILO95425 2214 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 MYO18BQ8IUG5 2567 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 POLEQ07864 2286 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 A1L4Q6 167 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TMEM247A6NEH6 219 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 BBIP1A8MTZ0 92 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 EVPLLA8MZ36 301 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 E9PLN8 166 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 H0Y3Z8 333 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 H3BML4 177 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 J3QL48 77 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FXYD1O00168 92 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF264O43296 627 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 SEC14L5O43304 696 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ACTL6AO96019 429 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 GUSBP08236 651 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 POU3F2P20265 443 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PPIBP23284 216 aaKnown RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ACVR2AP27037 513 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 MSX1P28360 303 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 MAGEA8P43361 318 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 LHX2P50458 406 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 P2RX1P51575 399 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PER3P56645 1201 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ADORA2A-AS1P86434 159 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PLAURQ03405 335 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FOXF1Q12946 379 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FADDQ13158 208 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 SKP2Q13309 424 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 CYLC2Q14093 348 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 FGFBP1Q14512 234 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TOMM34Q15785 309 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TRMT5Q32P41 509 aaKnown RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PLPPR5Q32ZL2 321 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 C1orf185Q5T7R7 199 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 RTL6Q6ICC9 239 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 AAGABQ6PD74 315 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ENPP6Q6UWR7 440 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PLXDC2Q6UX71 529 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 EIF3MQ7L2H7 374 aaKnown RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 LSRQ86X29 649 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 VRK2Q86Y07 508 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TREML1Q86YW5 311 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 NFKBIDQ8NI38 313 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF524Q96C55 264 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 RCN3Q96D15 328 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 WDYHV1Q96HA8 205 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 RNF145Q96MT1 663 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 DMRTA2Q96SC8 542 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TREX2Q9BQ50 279 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PIGQQ9BRB3 760 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 THUMPD3Q9BV44 507 aaKnown RBP9.29□□□□□ -0.92
HDAC6-222ENST00000478095 CCDC106Q9BWC9 280 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 PRDM14Q9GZV8 571 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 TMEM185BQ9H7F4 350 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 A4GALTQ9NPC4 353 aa9.29□□□□□ -0.92
HDAC6-222ENST00000478095 THUMPD1Q9NXG2 353 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms