RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 EXD2Q9NVH0 621 aa12.42□□□□□ -0.42
HDAC7-222ENST00000477937 PAQR5Q9NXK6 330 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-222ENST00000477937 DTNAQ9Y4J8 743 aa12.42□□□□□ -0.42
HDAC7-222ENST00000477937 E9PBE3 544 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 SLCO1B7G3V0H7 640 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 SDHDO14521 159 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 HDAC3O15379 428 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 STX11O75558 287 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 SMNDC1O75940 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 CPSF4O95639 269 aaKnown RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 NUDT14O95848 222 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 AK1P00568 194 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 LINGO3P0C6S8 592 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 KITP10721 976 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 FCGR2AP12318 317 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 PSMA4P25789 261 aaKnown RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 S100A3P33764 101 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 KIR2DL2P43627 348 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 EIF1AXP47813 144 aaKnown RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 P2RX1P51575 399 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 RPS26P62854 115 aaKnown RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 PHC1P78364 1004 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 CASP8Q14790 479 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 ARHGAP11BQ3KRB8 267 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 FAM174BQ3ZCQ3 159 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 SPANXN4Q5MJ08 99 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 PDSS1Q5T2R2 415 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 FBXW10Q5XX13 1052 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 C16orf62Q7Z3J2 963 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 TLCD1Q96CP7 247 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 RNF145Q96MT1 663 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 NPAS1Q99742 590 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 NMUR2Q9GZQ4 415 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 CLEC4MQ9H2X3 399 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-222ENST00000477937 SERHL2Q9H4I8 314 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 CARD8Q9Y2G2 431 aa12.41□□□□□ -0.42
HDAC7-222ENST00000477937 GOLGA8QA0A0J9YX86 632 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 GOLGA8OA6NCC3 632 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 NPIPB9F8W1W9 429 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 GOLGA8NF8WBI6 632 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 SYNGR4O95473 234 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 AGR2O95994 175 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 OPN1LWP04000 364 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 ALDOCP09972 364 aaKnown RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 EPHA3P29320 983 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 CPOXP36551 454 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 SUMO3P55854 103 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 NME5P56597 212 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 SIRPAP78324 504 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 GPR68Q15743 365 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 VWA1Q6PCB0 445 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 ESPNLQ6ZVH7 1005 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 POC1BQ8TC44 478 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 OR51I1Q9H343 314 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 AIG1Q9NVV5 245 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 MARCOQ9UEW3 520 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 NDRG3Q9UGV2 375 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 MCTS1Q9ULC4 181 aaKnown RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 GPC6Q9Y625 555 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 POLQO75417 2590 aa12.4□□□□□ -0.42
HDAC7-222ENST00000477937 ANKHD1Q8IWZ3 2542 aaKnown RBP12.4□□□□□ -0.42
HDAC7-222ENST00000477937 A0A0J9YW62 118 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF264O43296 627 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 EIF4E2O60573 245 aaKnown RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 AQP8O94778 261 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 GOSR1O95249 250 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 PLGP00747 810 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 OR12D1P0DN82 309 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 ADH6P28332 368 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 DNAJA1P31689 397 aaKnown RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 CHI3L1P36222 383 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 PCYT1AP49585 367 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 CASP9P55211 416 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 UFM1P61960 85 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF141Q15928 474 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 CTU2Q2VPK5 515 aaKnown RBP12.39□□□□□ -0.43
HDAC7-222ENST00000477937 PDZK1Q5T2W1 519 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 HBMQ6B0K9 141 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 NXNQ6DKJ4 435 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 CDC20BQ86Y33 519 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 LILRA2Q8N149 483 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
HDAC7-222ENST00000477937 TOR1AIP2Q8NFQ8 470 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms