RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 NTRK2Q16620 822 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SLC25A35Q3KQZ1 300 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SLC25A52Q3SY17 297 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 NKAIN1Q4KMZ8 207 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 FILIP1LQ4L180 1135 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 RWDD4Q6NW29 188 aaKnown RBP3.95□□□□□ -1.78
VPS50-214ENST00000477935 CERS6Q6ZMG9 384 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 HSD11B1LQ7Z5J1 315 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OOSP2Q86WS3 158 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 CFAP206Q8IYR0 622 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 ZNF611Q8N823 705 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OR11G2Q8NGC1 345 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OR2T11Q8NH01 316 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OR1L3Q8NH93 324 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 FAM57AQ8TBR7 257 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 MRGPRDQ8TDS7 321 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 TAF15Q92804 592 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS50-214ENST00000477935 MS4A10Q96PG2 267 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
VPS50-214ENST00000477935 TRIM51Q9BSJ1 452 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 ABCG8Q9H221 673 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SDR39U1Q9NRG7 319 aaPredicted RBP3.95□□□□□ -1.78
VPS50-214ENST00000477935 LHX3Q9UBR4 397 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 NPIPA1Q9UND3 350 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 TMEM5Q9Y2B1 443 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SNX10Q9Y5X0 201 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SNX8Q9Y5X2 465 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 FEZF1A0PJY2 475 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 RGSL1A5PLK6 1076 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 KMOO15229 486 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 DNAJB6O75190 326 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 GRAP2O75791 330 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 CDC123O75794 336 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 OR2B3O76000 313 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 LCA5LO95447 670 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 UQCRHP07919 91 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 PVRP15151 417 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 CDH3P22223 829 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 EEF1DP29692 281 aaKnown RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 ZFP36L2P47974 494 aaKnown RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 CLK1P49759 484 aaKnown RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 SULT1E1P49888 294 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 LUMP51884 338 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 PPP1CAP62136 330 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 CETN1Q12798 172 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 RFTN1Q14699 578 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 RBBP7Q16576 425 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 HYAL4Q2M3T9 481 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 LIPNQ5VXI9 398 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 C3P1Q6ZMU1 363 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 NDUFAF7Q7L592 441 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 SIAH3Q8IW03 269 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 ARHGAP24Q8N264 748 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 TTC30BQ8N4P2 665 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 TMEM178AQ8NBL3 297 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 ZNF606Q8WXB4 792 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 PSMF1Q92530 271 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 N4BP2L2Q92802 583 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 SIGLEC12Q96PQ1 595 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 MCCC1Q96RQ3 725 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 TIMM29Q9BSF4 260 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 CHRNA10Q9GZZ6 450 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 SLC26A1Q9H2B4 701 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 SLC35C2Q9NQQ7 365 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 ZDHHC18Q9NUE0 388 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 MRPL15Q9P015 296 aaKnown RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 KLHL8Q9P2G9 620 aaPredicted RBP3.94□□□□□ -1.78
VPS50-214ENST00000477935 DNPEPQ9ULA0 475 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 PPIL1Q9Y3C6 166 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 ALG6Q9Y672 507 aa3.94□□□□□ -1.78
VPS50-214ENST00000477935 DOCK10Q96BY6 2186 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 NSG1A0A0A6YYJ2 146 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 GSAPA4D1B5 854 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 TRIM64A6NGJ6 449 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 TRIM64BA6NI03 449 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 OR52A4PA6NMU1 304 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 CHUKO15111 745 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 PALMO75781 387 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 ZFAND5O76080 213 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 TBX6O95947 436 aaPredicted RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 EPB41P11171 864 aaKnown RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 ZNF7P17097 686 aaPredicted RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 LHCGRP22888 699 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 CA6P23280 308 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 HSPA9P38646 679 aaKnown RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 NSG1P42857 185 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 NKX2-1P43699 371 aaPredicted RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 RAB28P51157 221 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 CDH13P55290 713 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 GCNT1Q02742 428 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 RNASEH2BQ5TBB1 312 aaKnown RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 TXNRD3NBQ6F5E7 133 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 Q6ZSR9 355 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 ARCQ7LC44 396 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 TMEM139Q8IV31 216 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 CCDC71Q8IV32 467 aaPredicted RBP3.93□□□□□ -1.78
VPS50-214ENST00000477935 UMODL1-AS1Q8N2C9 162 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 LIX1Q8N485 282 aa3.93□□□□□ -1.78
VPS50-214ENST00000477935 MARVELD2Q8N4S9 558 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms