RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 HPCAL1P37235 193 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 MLC1Q15049 377 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 RNPS1Q15287 305 aaKnown RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 CD226Q15762 336 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 ZNF239Q16600 458 aaKnown RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 GALNTL6Q49A17 601 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 RFTN2Q52LD8 501 aaPredicted RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 CCNJQ5T5M9 372 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 ALKBH2Q6NS38 261 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 MTERF4Q7Z6M4 381 aaKnown RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 PRIMA1Q86XR5 153 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 C10orf107Q8IVU9 208 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 OR2T11Q8NH01 316 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 KIF18AQ8NI77 898 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 POC1BQ8TC44 478 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 PHOSPHO1Q8TCT1 267 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 ROBO4Q8WZ75 1007 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 AKAP1Q92667 903 aaKnown RBP eCLIP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 FAM120BQ96EK7 910 aaKnown RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 OTUB1Q96FW1 271 aaPredicted RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 STACQ99469 402 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 RHOXF2Q9BQY4 288 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 GATA5Q9BWX5 397 aaPredicted RBP11.71□□□□□ -0.53
PABPC4-212ENST00000477556 HDHD5Q9BXW7 423 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 PPCSQ9HAB8 311 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 DUSP22Q9NRW4 184 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 FBXO34Q9NWN3 711 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 SNX8Q9Y5X2 465 aa11.71□□□□□ -0.53
PABPC4-212ENST00000477556 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 TMEM114B3SHH9 223 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 LSM1O15116 133 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 TRIM13O60858 407 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 SHBGP04278 402 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 HMGN2P05204 90 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 IL32P24001 234 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 ADH6P28332 368 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 RPL3P39023 403 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 FOXF1Q12946 379 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 LRIG3Q6UXM1 1119 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 TDRPQ86YL5 185 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 DDIASQ8IXT1 998 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 ZNF527Q8NB42 609 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 LRRN4CLQ8ND94 238 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 ABHD3Q8WU67 409 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 UBLCP1Q8WVY7 318 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 HOXD1Q9GZZ0 328 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 C12orf65Q9H3J6 166 aaKnown RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 PIGUQ9H490 435 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 TUBB1Q9H4B7 451 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
PABPC4-212ENST00000477556 GPC6Q9Y625 555 aaPredicted RBP11.7□□□□□ -0.54
PABPC4-212ENST00000477556 KIAA1324LA8MWY0 1029 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ZNF195O14628 629 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 SOX30O94993 753 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 CD3EP07766 207 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 KRT16P08779 473 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 BCKDHAP12694 445 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 KRT4P19013 534 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 MAPK1P28482 360 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 SHC1P29353 583 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 P2RX1P51575 399 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ZNF117Q03924 483 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 PCLAFQ15004 111 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 KANK2Q63ZY3 851 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ADAM5Q6NVV9 412 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 CDC73Q6P1J9 531 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 TFAP2EQ6VUC0 442 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 FCRLAQ7L513 359 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 C4orf33Q8N1A6 199 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ADAMTS15Q8TE58 950 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 TWIST2Q8WVJ9 160 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 CDS1Q92903 461 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 FBXW5Q969U6 566 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 KLHDC3Q9BQ90 382 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 GP6Q9HCN6 339 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 SIRT3Q9NTG7 399 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 GIN1Q9NXP7 522 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 KLHL13Q9P2N7 655 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 ATP6V1HQ9UI12 483 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 FAF1Q9UNN5 650 aaPredicted RBP11.69□□□□□ -0.54
PABPC4-212ENST00000477556 LAMP3Q9UQV4 416 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 DNAJC15Q9Y5T4 150 aa11.69□□□□□ -0.54
PABPC4-212ENST00000477556 DNHD1Q96M86 4753 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms