RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PMPCAQ10713 525 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 KLF10Q13118 480 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 SELPLGQ14242 412 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 RGNQ15493 299 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 TMEM44Q2T9K0 475 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 RPS26P11Q5JNZ5 115 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ATAD3BQ5T9A4 648 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 RAET1LQ5VY80 246 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 RPTNQ6XPR3 784 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 MRGPRGQ86SM5 289 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ULK2Q8IYT8 1036 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF619Q8N2I2 560 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 B4GALNT2Q8NHY0 566 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 SLC38A5Q8WUX1 472 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 MAL2Q969L2 176 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ELAC2Q9BQ52 826 aaKnown RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 TTYH2Q9BSA4 534 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 PTGES2Q9H7Z7 377 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 MED17Q9NVC6 651 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ARMCX1Q9P291 453 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 SUCOQ9UBS9 1254 aaKnown RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 LEF1Q9UJU2 399 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 CAMK2AQ9UQM7 478 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 NDUFAF1Q9Y375 327 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF337Q9Y3M9 751 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 L3MBTL1Q9Y468 752 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ARHGAP21Q5T5U3 1957 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 OR2M5A3KFT3 312 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 H3BML4 177 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 EFNA2O43921 213 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ADAM11O75078 769 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 WDR1O75083 606 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 TOXO94900 526 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ACTL6AO96019 429 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 OPN1LWP04000 364 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 BCHEP06276 602 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 GUSBP08236 651 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 SNRPB2P08579 225 aaKnown RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 LINGO3P0C6S8 592 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 GLI4P10075 376 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 NR2F1P10589 423 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF708P17019 499 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 IL11P20809 199 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 DRD4P21917 467 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 CHMP24386 653 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 PSMA4P25789 261 aaKnown RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 COL8A1P27658 744 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 MSX1P28360 303 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 LSP1P33241 339 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 PGM1P36871 562 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ADH7P40394 386 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 PER3P56645 1201 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 GNGT1P63211 74 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 SKP2Q13309 424 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 FGFBP1Q14512 234 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 GANABQ14697 944 aaKnown RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF630Q2M218 657 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 PLPPR5Q32ZL2 321 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ACSF3Q4G176 576 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 RUNDC3AQ59EK9 446 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 C1orf185Q5T7R7 199 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 B3GNT6Q6ZMB0 384 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 LRRC74BQ6ZQY2 392 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 DHDDSQ86SQ9 333 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 CCDC71Q8IV32 467 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 MISPQ8IVT2 679 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 DPP10Q8N608 796 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF527Q8NB42 609 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 GPR119Q8TDV5 335 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 PHF10Q8WUB8 498 aaKnown RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 TMEM19Q96HH6 336 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 TRNT1Q96Q11 434 aaKnown RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 TUBA1CQ9BQE3 449 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 CPPED1Q9BRF8 314 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 RSPO3Q9BXY4 272 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-208ENST00000476739 POLE3Q9NRF9 147 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 ETAA1Q9NY74 926 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 LIPT1Q9Y234 373 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 RNF6Q9Y252 685 aa8.76□□□□□ -1.01
HDAC3-208ENST00000476739 NBPF19A0A087WUL8 3843 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 A0A0G2JNJ9 132 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 LOC100653049A0A140TA62 436 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 AGAP5A6NIR3 686 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 AHRRA9YTQ3 701 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 H3BNH8 94 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 GTPBP1O00178 669 aaKnown RBP8.75□□□□□ -1.01
HDAC3-208ENST00000476739 ANGPT2O15123 496 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 ZNF264O43296 627 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 CYP7B1O75881 506 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 KRT34O76011 436 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 CSTAP01040 98 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 UBTFL6P0CB48 400 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-208ENST00000476739 UBL4AP11441 157 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 BMP2P12643 396 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 GABRA1P14867 456 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 CPN1P15169 458 aa8.75□□□□□ -1.01
HDAC3-208ENST00000476739 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
HDAC3-208ENST00000476739 GRNP28799 593 aaKnown RBP8.75□□□□□ -1.01
HDAC3-208ENST00000476739 P2RX1P51575 399 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms